Tenacibaculum tangerinum: P8625_08125
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Entry
P8625_08125 CDS
T09624
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ttg
Tenacibaculum tangerinum
Pathway
ttg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
P8625_08125 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttg03400
]
P8625_08125 (ruvB)
Enzymes [BR:
ttg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P8625_08125 (ruvB)
DNA repair and recombination proteins [BR:
ttg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P8625_08125 (ruvB)
RecFOR pathway proteins
P8625_08125 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
AAA_3
TIP49
AAA_14
nSTAND3
AAA_16
AAA_33
TsaE
AAA_18
RNA_helicase
Rad17
AAA_PrkA
DDR_swiveling
NB-ARC
AAA_28
NACHT
AAA_24
AAA_17
AAA_11
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WGH74088
LinkDB
All DBs
Position
complement(1852021..1853043)
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AA seq
340 aa
AA seq
DB search
MNENLNPENENYSNEELDVEKKLRPLSFDDFTGQDQAIDNLKIFVEAANQRDEALDHTLF
HGPPGLGKTTLAHILASELGVGIKVTSGPVLDKPGDLAGLLTNLDERDVLFIDEIHRLSP
IVEEYLYSAMEDYKIDIMIESGPNARTVQINLEPFTLVGATTRSGLLTAPMRARFGISSR
LHYYSTELLTTIVQRSAYILKVPISMEAAIEIAGRSRGTPRIANALLRRVRDFAQIKGDG
TITIEIARYALKALNVDAHGLDEMDNKILSTIIDKFKGGPVGISTLATAVAENAETIEEV
YEPFLIQQGFIMRTPRGREVTDLAYKHLGRLKGTSQGELF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaacttaaatcctgaaaatgagaactattcaaatgaagagttagatgtagaa
aaaaagctacgtccactctcctttgatgattttacgggtcaagatcaagcaatagacaat
ctaaagatatttgtagaagcagcaaatcaacgagatgaagccctagatcataccttgttt
cacggtcccccaggcttaggaaaaaccacgttagcccatattttagcaagcgagttggga
gtgggaattaaagttacctctgggcctgtgttagacaaaccaggagacttagcaggattg
ctaaccaacctcgatgaacgagatgtgttgtttatagatgaaatacatcgactaagccct
attgttgaagaatacctgtattctgccatggaagattataaaatcgatatcatgattgaa
tcaggcccgaatgcccgcaccgttcaaattaatttagagccatttactttagtaggtgcg
accacacggtcaggattactaacagcacccatgcgcgctcgttttggtattagtagccga
ttacattactattcaacagaattgctaacaaccattgttcaacgaagtgcctatatttta
aaagtacctatttctatggaagcagcaattgaaattgcgggtagaagtagaggaactccc
cgtattgcgaacgcattgctacgaagagtacgtgattttgcacaaataaaaggagatggt
accattaccatagaaattgcacgatatgcccttaaagcgttaaatgttgacgcacatggt
ttagatgaaatggacaataaaattttatctacgattatcgataaatttaaaggaggtcca
gttggaataagcaccttagctacagcagtagccgagaatgcagaaacgatagaagaagtg
tacgaaccgtttctaatacagcaaggatttattatgcgtacaccaagaggaagggaagta
accgatttggcctataaacacttaggaagactcaaaggaacgagtcaaggagaacttttt
taa
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