Tenacibaculum tangerinum: P8625_08425
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Entry
P8625_08425 CDS
T09624
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ttg
Tenacibaculum tangerinum
Pathway
ttg03030
DNA replication
ttg03430
Mismatch repair
ttg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P8625_08425 (dnaE)
03430 Mismatch repair
P8625_08425 (dnaE)
03440 Homologous recombination
P8625_08425 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttg03032
]
P8625_08425 (dnaE)
03400 DNA repair and recombination proteins [BR:
ttg03400
]
P8625_08425 (dnaE)
Enzymes [BR:
ttg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P8625_08425 (dnaE)
DNA replication proteins [BR:
ttg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P8625_08425 (dnaE)
DNA repair and recombination proteins [BR:
ttg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P8625_08425 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
HHH_3
Ldh_2
Cytochrom_C_2
Motif
Other DBs
NCBI-ProteinID:
WGH74145
UniProt:
A0ABY8L233
LinkDB
All DBs
Position
1929244..1933617
Genome browser
AA seq
1457 aa
AA seq
DB search
MYLIFDTETTGLPKSWNAPITDTDNWPRAIQIAWQLHDELGNLIEHNDFLIQPDGFNIPF
DAERIHGISTDLAIEQGISLHEGLELFNSALQKTKFIVGQNVGFDVNIMGCEFHRLGVEN
NLTELPVLDTCTEHTAALCQIPGGRGGKFKLPTLTELHKHLFGTGFGEAHNATADVEATT
RCFLELIRLREYTEEELQVSSDYFQRYTEANPNPIQVIGLKHLNLKKESEKIRKRKSSET
EEANTISTAEGLAELKGIQFAHLHNHTQYSVLQSTIQIGNIVNAAAKDKMSAIAMTDTGN
MMAAFHFVQAVLGHNKAAEAANKEAIEKGEKPTETILKPIVGCEFNVCEDHTNKSHKDNG
YQVVLLAKNKKGYHNLAKMSSIAFVDGFYYVPRIDKKIVEQYKEDIIVLTGNLYGEVPSK
ILNVGEAQAEEALLWWKEQFGDDLYIELMRHGQEDEKAVNETLLAFSKKHDIKVVATNNT
FYLNKEDANAHDILLCVKDGEKQATPKGRGRGYRYGLPNDEYYFKSTEEMKKLFADLPEA
ISNIQEIVDKVEPFGLARDVLLPAFDIPEEFRDEKDLEDGGKRGENNFLRHLTYEGAKKR
YGEITDEIRERLDFELDVIAKTGYPGYFLIVEDFIREARNMNVSVGPGRGSAAGSVVAYC
LWITNIDPIKYDLLFERFLNPERVSMPDIDIDFDDEGRSRVMDYVIRKYGANQVAQIITY
GTMAAKSSVRDTARVLDLPLFEADRIAKLIPGMKLAKIFSLDEKGLREKLRSEELEMVNE
LKAIANGNGLEAETINKARILEGSVRNTGIHACGVIITPDDITKFVPVSVAKDSDMYVTQ
FDNSVVESAGLLKMDFLGLKTLTLIKDTVKIVKARHGVALDPENFPIDDEKTYALFQRGE
TVGIFQYESPGMQKYMRELKPTVFADLIAMNALYRPGPLEYIPSFIRRKHGDEEIQYDLP
AMEEYLAETYGITVYQEQVMLLSQKLADFTKGEADVLRKAMGKKQAAVLAKMKPKFINQA
KANGHDEKALEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSNNM
NDIKQVSFFMEECKRMGLEVLGPDVNESYAKFSVNKDGAVRFGMAAIKGVGGSAVKAIID
ERKENGPYTSIFDVAKRVDLRVANKKAFEGLVLAGGFDSFTETHRAQYYVKDEKGQTFLE
KAIRFGNKFQENQNSSQVSLFGEASEVDLPEPLIPECDTWGTMELLAREKEVVGMYISAH
PLDDFKNELKFCNATLAHFKNIAQYEGLGLSFAGIVTDVQHRVSKAGKGWAAFTMEDYND
SFEFRIFGEDYLKFKHFLVPNSFLFIKTTIKPGWTNKEGGKGEPRVGFNEFLLLHDIMDK
MCKKLTIKIPLLEVKENTIKELQHLFATNKGSQSVHFTIWDAEEKIELSLPSRTTKIKVS
SEFLKALDEQFINYKLN
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaattttcgataccgaaactactggattacctaaaagctggaatgctccgata
actgatactgataactggccaagagctatacaaattgcatggcagttacacgatgagtta
ggaaatttaatcgagcataacgattttttaattcagcctgacggttttaacattccattt
gatgcagaacgtattcatggaatttctaccgatttggctattgaacaaggtatttcgtta
catgaaggactcgaattatttaacagcgcactacaaaaaactaagtttattgtcggtcaa
aatgtagggttcgacgtgaacattatgggctgtgaatttcatcgtttaggagttgaaaac
aacctaactgaactccctgttttagacacctgtactgaacacacagcagcattatgtcaa
attcctggtggtcgtggtggtaaattcaaattacctacacttaccgaattacacaagcat
ttattcggaactggttttggagaagcgcataatgcaaccgccgatgttgaagcaaccaca
cgatgtttcttagaactcatacgcttgcgtgagtataccgaagaagaattacaggtttct
agtgattattttcaacgttatacagaggcaaaccccaatccaattcaggttatcggactt
aaacacttaaaccttaaaaaggaaagtgagaaaatccgaaaaagaaaatcttctgaaaca
gaagaggcgaatactatttctaccgcagaaggattggcagaacttaaaggtattcagttt
gcacatttacacaaccatacacaatactcggttttacaatcaaccattcaaattggaaat
attgtaaatgctgccgctaaagataagatgtcggcaattgccatgaccgatacgggcaat
atgatggctgcttttcactttgttcaagctgtgttggggcataataaagctgccgaagca
gctaacaaagaagctatagaaaaaggagaaaaaccaaccgaaactattttaaaacccatc
gtaggttgtgaatttaatgtttgtgaagaccataccaataaaagtcataaagacaacgga
taccaagttgtcttattagcaaaaaataaaaaaggataccacaatttagcaaaaatgtct
tccattgcctttgtggatggcttttattacgttccgagaattgacaaaaaaattgtggag
caatacaaagaagatatcattgtattaacaggaaatttatacggtgaggttcctagtaaa
atattaaatgttggagaagcccaagctgaagaggcactattgtggtggaaagaacaattc
ggagatgatttgtacatcgaattgatgcgccacggacaggaagacgaaaaagcagtaaat
gaaaccctgttagcgttttcaaaaaaacatgacatcaaagtagttgccaccaacaatact
ttttatttgaataaagaagacgccaacgcacacgacattttactatgtgtaaaagatggt
gaaaagcaagcgactcctaaagggagaggaagagggtatcgttatggattacctaacgat
gagtactactttaaatctaccgaagagatgaaaaaactctttgccgatttacctgaagcc
attagtaatattcaagaaattgttgataaagttgaaccttttggtttggcacgtgacgta
ctgttacctgctttcgatattcctgaagagtttagagacgaaaaagatttagaagatggc
ggaaaacgcggtgaaaataatttcttgcgtcacttaacttatgaaggtgccaaaaaacgt
tatggagaaattaccgatgaaattcgagaacgtttagattttgaactcgatgtaattgcc
aaaacaggatatcctggatatttcttaattgtagaagattttattcgagaagcccgtaac
atgaatgtatcggtaggtccgggtcgtggttctgctgcgggttctgtagtagcttactgt
ttgtggattaccaacatcgaccctatcaaatacgatttactttttgagcgtttcttaaat
ccagaacgtgtatcgatgcccgatattgatattgattttgacgatgaaggtagaagtcgt
gtaatggattatgtaattcgaaagtatggtgccaatcaggtggcacaaattattacttac
ggtaccatggcagctaaatcatctgtccgtgatacagctcgtgtgctcgatttgccctta
tttgaagctgatagaattgccaaattaatcccaggaatgaaactcgctaaaattttctca
ttagacgagaaaggattgagagaaaagcttcgttctgaggaactagaaatggtaaacgag
ttaaaagctattgccaatggtaacggactggaagctgaaacgattaacaaagctcgaatt
ttagaaggctcggttcgtaatactggtattcatgcttgtggagtcattattacccctgat
gacattaccaaattcgtacccgtatcggttgcgaaagattccgatatgtacgttactcag
ttcgataactcagtggtagaaagtgcgggactcttaaaaatggatttcttggggttaaaa
accttgaccctgattaaagataccgtaaaaattgtaaaggcacgtcacggtgtagcactc
gacccagagaattttcctattgatgatgaaaaaacgtatgcattgttccaacgtggagaa
acggtaggaatattccaatacgaatctccaggaatgcaaaagtacatgcgtgagttaaag
cctaccgtttttgccgatttaattgccatgaacgctttgtatcgacctggaccgttggaa
tacattccgtcctttatccgaagaaaacacggggatgaagaaattcaatacgaccttcct
gctatggaagaatatttagccgaaacttacggaattacggtatatcaggagcaagtaatg
ttgctttcgcaaaagttagctgatttcaccaaaggtgaggccgatgtattgcgtaaagcg
atgggtaaaaagcaagctgcggtattggcaaaaatgaaacctaagtttatcaatcaagca
aaagcaaacggtcatgatgaaaaagctttagaaaaaatttggaaagattgggaggctttt
gcatcctacgcctttaacaaatcgcactctacatgttatgcttggattgcctatcaaacg
gcttatttaaaagcccactaccctgctgaatatatggctgcagtgctttctaacaatatg
aacgatattaagcaggtgtctttctttatggaagaatgtaagcgtatgggattggaggta
ttaggacccgatgtaaatgaatcgtatgcgaagttttccgtaaataaagacggtgctgtt
cgttttggtatggcagctattaaaggagttggtggttccgctgtgaaagctattattgat
gaacgcaaagaaaacggaccttacacttctatttttgatgtggcaaaacgtgttgattta
cgggtggctaacaaaaaagcttttgaaggtttggtattggctggtggatttgattccttt
accgaaacgcatagagcgcagtattatgtgaaagatgaaaaaggacaaacatttttagaa
aaggctattcgttttggtaataaatttcaagaaaaccagaattcatctcaggtttcttta
tttggagaggcttcggaagttgatttaccagaaccgctaattcctgaatgtgatacttgg
ggaacgatggagttgttagctcgtgaaaaggaagttgtaggaatgtatatttctgcacat
ccgttagatgattttaaaaacgaactcaaattttgtaacgccaccttagcgcattttaaa
aatatagcacagtacgaaggtttaggactctcttttgcgggtattgttaccgatgtacaa
catcgtgtgtcaaaagctggaaaaggatgggctgcatttactatggaagattataacgat
agttttgagtttcgaatttttggagaagattacttaaaatttaaacactttttagtgcca
aactccttcttatttataaaaaccaccatcaagcctggttggactaacaaagaaggggga
aaaggagagcctagagttggatttaacgagtttttattgttacacgacattatggataaa
atgtgtaagaaactcaccattaaaattccgctactagaagtaaaagaaaataccattaaa
gaattacaacatctatttgcgacgaataaagggtcgcaaagtgtacactttacaatatgg
gatgccgaagaaaaaattgaactcagtttaccaagtagaacgactaaaattaaagtatcg
agtgaatttttaaaagccttggacgaacagtttatcaattataaattgaattaa
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