Tenacibaculum tangerinum: P8625_15495
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Entry
P8625_15495 CDS
T09624
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ttg
Tenacibaculum tangerinum
Pathway
ttg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ttg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P8625_15495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttg03021
]
P8625_15495
03400 DNA repair and recombination proteins [BR:
ttg03400
]
P8625_15495
Enzymes [BR:
ttg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P8625_15495
Transcription machinery [BR:
ttg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P8625_15495
DNA repair and recombination proteins [BR:
ttg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P8625_15495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
WGH75453
LinkDB
All DBs
Position
3421942..3422934
Genome browser
AA seq
330 aa
AA seq
DB search
MAILNFQKPDKVIMIESTDFSGRFEFRPLEPGFGLTVGNALRRVLLSSLEGFAITSLRID
GVDHEFSTIEGVVEDVTEIILNLKQVRFKKQIEESDRETVSIAVSGQEQLTAGDLQKFIS
GFQVLNPDLVICNMDKSVKLNAEITIEKGRGFVPAEENKRAGAPLGTIFTDSIYTPIKNV
KYAVENFRVEQKTDYEKLVFDIDTDGSINPKDALTEAAKILIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKSDLMKFRNFG
KKSLTELDELVANKGLSFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttaaattttcaaaagcctgataaagtaataatgattgaatctactgatttt
tcaggaagattcgaattcagacctcttgaaccaggttttggattaaccgtagggaacgcc
ttacgaagagtattattatcttctttagaaggatttgcaattacatcattacgtatcgac
ggggttgatcatgaattttcaacaatcgagggtgttgtagaagatgtaacagaaatcatc
ttaaacttaaaacaagtacgttttaagaaacaaatagaagaatctgatagagaaacagtt
tctatagcagtatcaggacaagagcaattaacagctggtgacttgcaaaagtttatctca
ggttttcaagtgctaaatccagatttagtaatttgtaacatggataaatcagtaaagttg
aatgctgaaattaccattgaaaaaggtagaggttttgtaccagcagaagaaaataaaaga
gctggtgcacctttaggaaccatttttacagattctatttacactcctataaagaatgta
aaatacgctgttgaaaatttccgtgtagagcaaaagaccgattacgaaaaattagttttc
gatatcgatactgacggttctatcaacccaaaagatgccttaacagaagcagctaagatt
ttaatccaccactttatgttattctctgacgagcgtatcactttagaagcagatgaaatc
gcacaaactgaaacatacgatgaagaatcattacacatgcgtcagttattaaagacgaaa
ttagttgatatggatttatcagttcgtgctttaaactgtttaaaagctgcagaagtagat
actttaggagacttagtatcatttaacaaaagcgatttaatgaagtttagaaactttggt
aaaaaatcattaactgaattagatgagttagtggctaacaaaggactaagttttggaatg
gatttaagtaaatacaaattagataaagattaa
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