Thermus thermophilus HB27: TT_C0258
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Entry
TT_C0258 CDS
T00170
Name
(GenBank) hypothetical conserved protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
tth
Thermus thermophilus HB27
Pathway
tth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TT_C0258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tth03400
]
TT_C0258
DNA repair and recombination proteins [BR:
tth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TT_C0258
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TT_C0258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AAS80606
UniProt:
Q72L07
LinkDB
All DBs
Position
complement(248633..249508)
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AA seq
291 aa
AA seq
DB search
MAARMRTGTAYLRRRRIRSERARRTLPRKVKIHPPSQKARSTPTTTKSPSTTHSRMSLSV
RSMAPAYTGKVERYRLEEGIVVGRKPLPQGDLLLRLVTPKGSLEAVVRKGQRPTGRTGRL
SLFHHVRFQLYAKGEGLPTLTQAELLGRLHGLEAPRRFLLAAFLAELAYRLASPEAAPRI
YPLLVSGLRGIAKHEDPLLPLVWAGWRVAKAGGIGPSLEGEGLRLKGGRLGEEGVYLGRE
GVEALKATLRLPGAQALPHLEGAPLNRLFLALKAHAEEALGPLRSAEAIGV
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaggatgaggacgggcacggcgtacttgaggaggaggaggatcaggtcggag
agggcgaggaggaccttgcccaggaaggtgaagatccaccccccgagccagaaggcgagg
agcacccccacgaccaccaaaagccccagcaccacccactccaggatgtccctcagcgtg
cgctccatggctccagcatacactggaaaggtggaacgctaccggctggaagagggcatc
gtggtgggccgaaagcccctgccccagggggacctcctcctccgcctggtgacgcccaag
gggagcctcgaggcggtggtccggaaggggcagaggcccacggggcgtacggggaggctc
tccctcttccaccacgtgcgcttccagctctacgccaagggggagggcctgcccaccctg
acccaggcggagcttttgggcaggctccacggcctggaggcgccccgccgcttcctcctc
gccgccttcctcgccgagctcgcctaccgcctggcctcccccgaggccgcccccaggatc
tacccccttctggtctcgggcctccgggggatcgccaagcacgaggaccccctccttccc
ctggtctgggcgggctggcgggtggccaaggcgggggggatcgggcccagcctggaaggg
gagggcctccgcctgaagggggggaggctcggggaggagggggtctacctggggcgggag
ggggtggaggccctaaaggccacgctccgcctccccggggcccaggcccttccccacctg
gaaggggcccccttaaaccggctcttcctggcgctcaaggcccacgcggaggaggccctg
gggcccttgcgctcggccgaggctataggggtttga
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