Thermus thermophilus HB27: TT_C0700
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Entry
TT_C0700 CDS
T00170
Name
(GenBank) transcription termination factor rho
KO
K03628
transcription termination factor Rho
Organism
tth
Thermus thermophilus HB27
Pathway
tth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TT_C0700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tth03021
]
TT_C0700
03019 Messenger RNA biogenesis [BR:
tth03019
]
TT_C0700
Transcription machinery [BR:
tth03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
TT_C0700
Messenger RNA biogenesis [BR:
tth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TT_C0700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
NACHT
AAA_22
Spore_III_AA
AAA_24
ATPase_2
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
AAS81048
UniProt:
Q72JR8
LinkDB
All DBs
Position
complement(684635..685915)
Genome browser
AA seq
426 aa
AA seq
DB search
MRRKETLQETPLTYQELASKILPELHLLAQEAGIEGYKRMKKDQLIMALLERQTQGEGLR
LVKGYLEISQDGYGFLTENLHNLESRVAIVSAGLIKQYALRAGDYVVGQARPPRENERYA
TLLKVEAVNNLDPEAAKNRPRFDELTPQFPDRQIRLETTPDELSTRVIDLLAPIGRGQRG
LIVAPPKAGKTTLLKKIANAVLKNEPDIKVIVLLIDERPEEVTDFRESVQGAEVIASTFD
EPPQNHIRVAEFVHERAKRIVEEGGHVMILLDSITRLARANNLVTPPTGRTLSGGLDSAA
LYFPKRFLGAARNIRGGGSLTILATALVETGSRMDDVIFEEFKGTGNMELHLSRRLEERR
IFPAIDILKSGTRREELLLGEEVTHKMWLLRKVLADMDPAEAMEMLLARLARTKNNKEFL
ASLAAR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggaaggaaacccttcaggaaactcccctcacctaccaggagctcgccagcaag
atcctgcccgagctccacctcctggcccaggaggcgggcattgaaggctacaagcgcatg
aagaaggaccagctcatcatggccctcctggagcggcagacccagggagaggggctgagg
ctggtcaagggctacctggagatcagccaggacgggtacggcttcctcaccgagaacctc
cacaacctggagtcccgggtggccatcgtctcggcggggctcatcaagcagtacgccctg
agggccggggactacgtggtgggccaggccaggccgccccgggagaacgagcgctacgcc
accctcctcaaggtggaggcggtgaacaacctggaccccgaggccgccaagaaccgcccc
cgctttgacgagctcaccccccagttccccgaccggcagatccggttggagaccaccccg
gacgagctctccacccgggtcattgacctcctcgcccccatcggccggggccagcgcggc
ctcatcgtggcccctcccaaggcggggaagaccaccctcctcaagaagatcgccaacgcc
gtcctcaagaacgagcccgacatcaaggtcatcgtcctcctcattgacgagcgccccgag
gaggtcacggacttccgggagagcgtccaaggcgccgaggtcatcgccagcacctttgac
gagcctccccagaaccacatccgcgtggccgagttcgtccacgagagggccaagcgcatc
gtggaggagggcgggcacgtgatgatcctcctggactccatcacccgcctggcccgggcg
aacaacctggtgaccccgcccacggggcgcaccctctcgggcggtctggactccgccgcc
ctctacttccccaagcgcttcctgggggcggcccggaacatccgtgggggcgggagcctc
accatcctcgccaccgccctcgtggagacgggcagccgcatggacgacgtgatctttgag
gagttcaaggggacgggcaacatggagctccacctctcccgccgcctggaggagcggcgc
atcttccccgccattgacatcctcaagtccggcacgaggcgggaggagcttttgctcggc
gaggaggtcacccacaagatgtggctcctgcgcaaggtcctggcggacatggaccccgcg
gaggccatggagatgctcctcgcccggctcgcccgcaccaagaacaacaaggagttcctg
gcctccctggccgcccgctga
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