Thermus thermophilus HB27: TT_C0774
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Entry
TT_C0774 CDS
T00170
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tth
Thermus thermophilus HB27
Pathway
tth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TT_C0774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tth03019
]
TT_C0774
03016 Transfer RNA biogenesis [BR:
tth03016
]
TT_C0774
Enzymes [BR:
tth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TT_C0774
Messenger RNA biogenesis [BR:
tth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TT_C0774
Transfer RNA biogenesis [BR:
tth03016
]
Prokaryotic type
tRNA degradation factors
TT_C0774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
PCB_OB
S1_2
Motif
Other DBs
NCBI-ProteinID:
AAS81120
UniProt:
Q72JJ8
LinkDB
All DBs
Position
752877..755018
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AA seq
713 aa
AA seq
DB search
MEGTPNVPQAHRYELTLAGRPLVLETGKYAKQASGSVLVRYADTVVLATAQASETPVEAD
FLPLTVEFEERHYAVGKIPGSFMRREGRPGEKAILSARMTDRPIRPLFPKGFRHEVQIIV
TVLSADQKNPPDILGPIAASAALMLSDIPWEGPIAAVRVGLIGGSFVLNPTLQELEESQL
DLVVAGSKEAILMVEAEAGEVDEETLVQALEFAHKEMQPILELQEAMARELAKPKMAWTP
PESLPEEEKEALYRLALERGLSQVLQTASKGERSRALAEFAERLIAEALPKGEDGTPDEG
KKPLYESAFDEVVRRELRRLVLEEGKRADGRGPKDLRPIWIEVDVLPRAHGSAVFTRGET
QVLGTVTLGTGRDEQILDDLGIDETEKFLVHYNFPPFSTGEVRRLRGVSRREVGHGNLAK
RALKAVMPKEEDFPYTIRVVGDVLESNGSSSMATVCAGCLALMDAGVPIRAPVAGVAMGL
VWEENRAVILTDILGLEDALGDMDFKVAGTRKGVTALQMDNKVGGLPREVLKEALLQARE
ARLKILDLMETVLPAPRPELKPFAPRILSLKVPVEKIGLVIGPGGKNVRALEELGVEVDI
EEDGTVRIYSSDLNAALEAKKRIEDLTREAKVGEIYEGTVTRITPFGAFISLFPGTEGLL
HISQIAPGRVERVEDHLKVGDVIKVKVHRIDERGKIDLIRPELEGKIPPRRRK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcacacccaatgtcccccaagcccaccgctacgagctcaccctggcggggcgg
cccctcgtcctggagacgggcaagtacgccaagcaggcctcggggtccgtcctggtccgc
tacgccgacaccgtggtcctggccacggcccaagcctcggagacgccggtggaggccgac
ttcctccccctcacggtggagtttgaggaaaggcactacgccgtggggaagatcccggga
agcttcatgcgccgggaggggcgtcccggggagaaggccatcctctccgcccgcatgacg
gaccgccccatcaggcccctcttccccaaggggttccgccacgaggtccagatcatcgtc
accgtcctctccgccgaccagaagaacccgccggacatcctgggccccatcgcggcgagc
gccgccctcatgctctcggacatcccctgggagggccccatcgccgccgtgcgggtgggc
ctcatcggcgggagcttcgtcctgaaccccaccctgcaggagctggaggaaagccagctg
gacctggtggtggcggggagcaaagaggccatcctcatggtggaggcggaggccggggag
gtggacgaggagaccctggtccaggccctggagttcgcccacaaggagatgcagcccatc
ctggagctccaggaggccatggcccgggaactcgccaaacccaagatggcctggactccc
ccggaaagcctccccgaggaggagaaggaggccctctaccgcctggccctggagcggggg
ctttcccaggtcctgcagacggcgagcaagggggaaaggagccgggcccttgcggagttc
gccgaacgcctcatcgccgaggccctccccaagggggaggacggcaccccggacgagggc
aagaagcccctctacgagagcgcctttgacgaggtggtgcgcagggagcttaggaggctc
gtcctcgaggagggcaagcgggcggacggccgcgggcccaaggacctcaggcccatctgg
attgaggtggacgtcctgccccgggcccacggctccgccgtcttcacccggggcgaaacc
caggtcctgggcaccgtcaccctgggcacgggccgggacgagcagatcctggacgacctg
ggcatagacgagaccgagaagttcctcgtccactacaacttcccccccttctccaccggg
gaggtgcggcgcctaaggggggtctcccgccgcgaggtggggcacggaaatttggccaag
cgggccctcaaggcggtgatgcccaaggaggaggacttcccctacaccatccgcgtggtg
ggggacgtcctggagtccaacggcagtagctccatggccacggtctgcgccggctgcctc
gccctcatggacgcgggcgtgcccatccgggccccggtggccggggtggccatgggcttg
gtgtgggaggagaaccgggcggtgatcctcacggatatcctgggcctcgaggacgccctc
ggcgacatggacttcaaggtggccgggacccgcaagggggtcaccgccttgcagatggac
aacaaggtggggggccttccccgcgaggtcctgaaggaggccctcctccaggcccgggag
gccaggctcaagatcctggacctgatggagaccgtcctccccgccccccggcccgagctc
aagcccttcgccccccggatcctctccctcaaggtgcccgtggagaagatcgggctcgtc
atcggccccgggggcaagaacgtgcgcgccctggaggagcttggggtggaggtggacatt
gaggaggacgggacggtccgcatctactccagcgacctcaacgccgccctcgaggcgaag
aagcgcatagaggacctcacccgcgaggccaaggtgggcgagatctacgagggcaccgtc
acccgcatcacccccttcggcgccttcatcagcctcttccccggcaccgaggggcttctc
cacatcagccagatcgccccgggccgcgtggagcgggtggaggaccacctcaaggtgggg
gacgtgatcaaggtcaaggtccaccgcattgacgagcggggcaagattgacctgatccgc
cccgagctggaaggcaagattccccccaggcggcgcaagtag
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