Thermus thermophilus HB27: TT_C1171
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Entry
TT_C1171 CDS
T00170
Name
(GenBank) putative ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tth
Thermus thermophilus HB27
Brite
KEGG Orthology (KO) [BR:
tth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tth03016
]
TT_C1171
Enzymes [BR:
tth01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
TT_C1171
Transfer RNA biogenesis [BR:
tth03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TT_C1171
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AAS81513
UniProt:
Q72IG1
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All DBs
Position
1137730..1139529
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AA seq
599 aa
AA seq
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MLRGVAALVVYKGKPALAEEKGGRLELTLEGGARQRVRPKDVLFLHPGPASLDLKVPEGE
EEAAWELLEGQTVSLRELAELVYGAYTPEAALGAYLLAQKGERFVLEGEGVRARTREELL
ALQEAERKRAERERAFQEALKRLKEGSPAPEDRPLLAEVEALARGERKESPVLRALNLPE
TPEAAHAFLLRLGLWQRENPHPRRLGLPLQPPDLPVPPLPEEDRVDLTHLPAFAIDDEGS
QDPDDAVFAEKVEGGFRLFVHVADVAALVPPKSPLDEEALRRGANLYLPEGTVPMLPPAV
TEALGLGLREVSPALTFELWVSEEGELLEERVYPSWVRVTRLTYREALGVEALRPLEALA
EAFRAKRLAAGALEIALPEVKVRVEGEEVRITPLPPYPSRVWVREAMLLAGYAAAHLAVR
EGLPFPFATQEAPARRVEGEGLAAMWEQRKALKRAQLKAVPAPHKGLGLPLYAQVTSPLR
RYLDLVAHQQLRAWLKGERPLSQAEVLERVGAAEAVADLVREAERKSKLHWTLLHLEAKG
YEGPGVLVERRGGQGVFLLPELGLTAQVALPKALPLNAEARLRFLEADLPALEARFALV
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgctaaggggcgtggccgcgctcgtcgtctacaaaggcaaacccgccctcgccgaggag
aaggggggccgcttggagctcacgctggaagggggcgcaaggcagagggtgcgtcccaag
gacgtcctcttcctccacccggggcccgcctccttggacctgaaggtgcccgagggggag
gaagaggccgcctgggaactcctggaggggcagacggtgagcctcagggagctcgccgag
ctggtctacggggcctacaccccggaggccgccctaggcgcctacctcctcgcccagaag
ggggagcgcttcgtcctcgagggggaaggggtccgggcccgcacccgggaggagcttctg
gccctacaggaggcggaaaggaagcgggcggagcgggaacgggccttccaggaggccctg
aagcgcctaaaggagggaagccccgcccccgaggaccgccccctcctcgccgaggtggag
gccctggcccggggggagaggaaggaaagccccgtcctccgggccctgaacctccccgaa
acccccgaggcggcccacgccttcctcctccgcctgggcctttggcaaagggaaaacccc
cacccaaggaggctcggccttcccctccagcccccggacctccccgtcccacccctcccc
gaggaggaccgggtggacctcacccacctccccgccttcgccatagacgacgagggaagc
caggaccccgacgacgccgtcttcgccgagaaggtggaagggggcttccgcctcttcgtc
cacgtggccgacgtggccgccctcgtcccccccaaaagccccctggacgaggaggccctg
cgccggggggcgaacctctacctccccgagggaaccgtgcccatgctcccccccgccgtc
accgaggcccttggcctgggcctaagggaggtctccccggccctcacctttgagctatgg
gtctcggaggagggggagcttctggaggagagggtctacccctcctgggtacgggtcacg
cgcctcacctaccgggaggccctgggggtggaggccctgaggcccctggaagccctggcg
gaggccttccgggcgaagcgcctcgccgcgggcgccctggagatcgccctccccgaggtg
aaggtgcgggtggagggggaggaggtccggatcacccccttgcccccctacccaagccgc
gtctgggtgcgggaggccatgctcctcgccgggtacgccgcggcccacctggcggtgcgg
gaggggcttcccttccccttcgccacccaggaggcccccgcaaggcgggtggagggggag
gggcttgccgccatgtgggagcagcggaaggccctgaagcgggcccagctcaaggcggtg
cccgccccccacaagggcttaggccttcccctctacgcccaggtgacgagccccctaagg
cgctacctggacctggtggcccaccagcagctcagggcctggctcaaaggggagaggccc
ctctcccaggccgaggtcctggaaagggtgggggcggcggaggcggtggccgacctggtg
cgggaggcggagcgcaagagcaagctccactggaccctcctccacctcgaggccaagggc
tacgaggggcccggcgtcctggtggaaaggcggggggggcagggggtcttcctcctcccc
gagctcggcctcaccgcccaggtggccctgcccaaggcccttcccctgaacgccgaggcc
cgcctccgcttcctggaggcggaccttccggccctcgaggcccgcttcgccctggtctag
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