Thermus thermophilus HB27: TT_C1461
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Entry
TT_C1461 CDS
T00170
Name
(GenBank) DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
tth
Thermus thermophilus HB27
Pathway
tth03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tth00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TT_C1461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tth03021
]
TT_C1461
03400 DNA repair and recombination proteins [BR:
tth03400
]
TT_C1461
Enzymes [BR:
tth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TT_C1461
Transcription machinery [BR:
tth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TT_C1461
DNA repair and recombination proteins [BR:
tth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TT_C1461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AAS81803
UniProt:
Q72HM5
LinkDB
All DBs
Position
complement(1382492..1385851)
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AA seq
1119 aa
AA seq
DB search
MEIKRFGRIREVIPLPPLTEIQVESYRRALQADVPPEKRENVGIQAAFRETFPIEEEDKG
KGGLVLDFLEYRLGEPPFPQDECREKDLTYQAPLYARLQLIHKDTGLIKEDEVFLGHIPL
MTEDGSFIINGADRVIVSQIHRSPGVYFTPDPARPGRYIASIIPLPKRGPWIDLEVEPNG
VVSMKVNKRKFPLVLLLRVLGYDQETLARELGAYGELVQGLMDESVFAMRPEEALIRLFT
LLRPGDPPKRDKAVAYVYGLIADPRRYDLGEAGRYKAEEKLGIRLSGRTLARFEDGEFKD
EVFLPTLRYLFALTAGVPGHEVDDIDHLGNRRIRTVGELMTDQFRVGLARLARGVRERML
MGSEDSLTPAKLVNSRPLEAAIREFFSRSQLSQFKDETNPLSSLRHKRRISALGPGGLTR
ERAGFDVRDVHRTHYGRICPVETPEGANIGLITSLAAYARVDELGFIRTPYRRVVGGVVT
DEVVYMTATEEDRYTIAQANTPLEGNRIAAERVVARRKGEPVIVSPEEVEFMDVSPKQVF
SVNTNLIPFLEHDDANRALMGSNMQTQAVPLIRAQAPVVMTGLEERVVRDSLAALYAEED
GEVAKVDGNRIVVRYEDGRLVEYPLRRFYRSNQGTALDQRPRVVVGQRVRKGDLLADGPA
SENGFLALGQNVLVAIMPFDGYNFEDAIVISEELLKRDFYTSIHIERYEIEARDTKLGPE
RITRDIPHLSEAALRDLDEEGVVRIGAEVKPGDILVGRTSFKGESEPTPEERLLRSIFGE
KARDVKDTSLRVPPGEGGIVVRTVRLRRGDPGVELKPGVREVVRVYVAQKRKLQVGDKLA
NRHGNKGVVAKILPVEDMPHLPDGTPVDVILNPLGVPSRMNLGQILETHLGLAGYFLGQR
YISPIFDGAKEPEIKELLAQAFEVYFGKRKGEGFGVDKREVEVLRRAEKLGLVTPGKPPE
EQLKELFLQGKVVLYDGRTGEPIEGPIVVGQMFIMKLYHMVEDKMHARSTGPYSLITQQP
LGGKAQFGGQRFGEMEVWALEAYGAAHTLQEMLTLKSDDIEGRNAAYEAIIKGEDVPEPS
VPESFRVLVKELQALALDVQTLDEKDNPVDIFEGLASKR
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggagatcaagcggttcggtcgcatccgagaggttatcccccttccacccctcaccgag
atccaggtggagtcctaccgcagggccctgcaggccgacgtccccccggagaagcgggag
aacgtcggcatccaggcggccttccgggagaccttccccattgaggaggaggacaagggc
aagggcggtctggtgctggacttcctggagtaccgcctgggcgagccccccttcccccag
gacgagtgccgggagaaggacctcacctaccaggcccccctctacgcccggctccagctc
atccacaaggacacgggcctcatcaaggaggacgaggtcttcctggggcacatccccctg
atgaccgaggacggctccttcatcatcaacggggccgaccgggtcatcgtctcccagatc
caccgctcccccggggtctacttcacccccgaccccgcccggcccgggcgctacatcgcc
agcatcatccccctgcccaagcggggcccctggattgacctggaggtggagccgaacggc
gtcgtctccatgaaggtcaacaagcggaagttccccctggtcctcctccttcgggtcctg
gggtacgaccaagagaccctggcccgggagcttggggcctacggggagctggtccagggc
cttatggacgagagcgtcttcgccatgcgccccgaggaggctctgatccgcctcttcacc
ctcctccgccccggggacccgcccaagcgggacaaggccgtggcctacgtctacggcctc
atcgccgaccccaggcggtacgacctgggcgaggccgggcggtacaaggcggaggagaag
ctggggatccgcctctcgggccgcaccctggcccgctttgaggacggggagttcaaggac
gaggtcttcctccccaccctccgctacctcttcgccctcaccgccggggtcccgggccac
gaggtggacgacattgaccacctgggcaaccgccgcatccgcaccgtgggggagctcatg
accgaccagttccgggtggggctcgcccgcctcgcccggggggtgcgggagcggatgctc
atgggctcggaggacagcctcaccccggccaagctggtgaacagccgccccttggaggcc
gccatccgggagttcttcagccgcagccagctttcccagttcaaggacgagaccaacccc
ctctcctccctgcgccacaagcggcggatctccgccctgggcccgggcggcctcacccgg
gagcgggcggggtttgacgtgcgcgacgtccaccgcacccactacgggcgcatctgcccc
gtggagacccccgagggcgccaacatcggcctcatcacctccttggcggcctacgcccgg
gtggacgagctgggcttcatccgcaccccctaccgccgggtggtgggcggggtggtcacc
gacgaggtggtctacatgacggccaccgaggaggaccgctacaccatcgcccaggccaac
acccccctggaggggaaccggatcgcggccgagcgggtggtggcccggaggaagggggag
cccgtgatcgtgagcccggaagaggtggagttcatggacgtctcccccaagcaggtcttc
tccgtgaacaccaacctcattcccttcctggagcacgacgacgccaaccgggccctcatg
ggctccaacatgcagacccaggccgtgcccctcatccgggcccaggcccccgtggtgatg
acgggcctcgaggagcgggtggtgcgggactccctggccgctctctacgccgaggaggac
ggggaggtggccaaggtggacggcaaccgcatcgtcgtgcgctacgaggacggccgcctg
gtggagtaccccttgcgccgcttctaccgctccaaccagggtacggccctggaccagcgc
ccccgggtggtggtggggcagcgggtgcgcaaaggggacctcctcgccgacggccccgcc
tccgagaacggcttcctggccctggggcagaacgtcctcgtggccatcatgccctttgac
gggtacaactttgaggacgccatcgtcatcagcgaggagctcctcaagcgggacttctac
acctccatccacattgagcgctacgagattgaggcccgggacaccaagcttggccccgag
cggatcacccgggacatcccccacctctccgaggccgccctaagggacctggacgaggag
ggcgtggtgcgcatcggcgccgaggtgaagcccggggacatcctcgtggggcggaccagc
ttcaagggcgagtccgagcccacccccgaggagaggctcctccgctccatcttcggcgag
aaggcccgggacgtgaaggacacctccctccgggtgccgcccggcgaaggggggatcgtg
gtccgcaccgtccggctgcggcggggcgaccccggggtggagctcaagcccggggtgcgg
gaggtggtccgggtctacgtggcccagaagcgcaagctccaggtgggggacaagctcgcc
aaccgccacgggaacaagggggtggtggccaagatcctccccgtggaggacatgccccac
ctgcccgacggcacccccgtggacgtgatcctgaaccccctgggcgtccccagccggatg
aacctggggcagatcctggagacccacctgggcctcgccggctacttcctgggccagcgc
tacatctcccccatctttgacggggccaaggagcccgagatcaaggagctcctcgcccag
gcctttgaggtctacttcggcaagcgcaagggcgagggcttcggcgtggacaagcgggag
gtggaggtcctccgccgggcggagaagctcggcctcgtgaccccgggcaagcccccggag
gagcagcttaaggagctcttcctccagggcaaggtggtcctctacgacggccgcacgggc
gagcccattgagggccccatcgtggtggggcagatgttcatcatgaagctctaccacatg
gtggaggacaagatgcacgcccgctccacggggccctactccctcatcacccagcagccc
ctgggcgggaaggcccagttcggcggccagcgcttcggggagatggaggtctgggccctc
gaggcctacggggcggcccacaccctccaggagatgctcacccttaagtccgacgacatt
gagggcaggaacgccgcctacgaggccatcatcaagggggaggacgttcccgagcccagc
gtccccgagtccttccgcgtgctggtgaaggagctccaggccttggccttggacgtgcag
accctggacgagaaggacaaccccgtggacatctttgaggggttggcctccaagcggtga
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