Thermus thermophilus HB27: TT_C1465
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Entry
TT_C1465 CDS
T00170
Name
(GenBank) hydrolase (HD superfamily)
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tth
Thermus thermophilus HB27
Pathway
tth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TT_C1465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tth03019
]
TT_C1465
Messenger RNA biogenesis [BR:
tth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TT_C1465
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
KhpA-B_KH
DUF1664
Propep_M14
KH_2
Motif
Other DBs
NCBI-ProteinID:
AAS81807
UniProt:
Q72HM1
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All DBs
Position
complement(1388166..1389890)
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AA seq
574 aa
AA seq
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MSLLDLVLLLLVLGLGGVLLLRRKGEDRSAQEARELLEAARREAREVLEAARKEARDILE
AARHEAKALRQEAEARAKAQREEVEAELRRRLEAAEAEAKKRLEEAGERLKAEREELRAE
RERLRSLQEELKEERERLKAEREELRREGERLAKRAEALDARAARLEEAEAELVRKEEAL
KAEARALEERFKEVERRLYEVAGLTPEEARRLVLERLDRELEEEKAQRVRAALERARLEA
RREAQKILAQAMQRQASETAAQLAVTVVPIPSDAMKGRIIGREGRNIRAFEALTGVDLII
DDTPDAVLLSSFNPIRREIARMALEELLKDGRIHPSRIEEVVEKAKQEMKTFIYERGEEA
ALEAGVVGLKPGLIQLLGRLHFRSSYGQNVLKHSIQVAHLAGIMAAELGLDAALARRAGL
LHDIGKSVDREVEGSHVEIGIALARRFGEPMEVVDAIAHHHDPDNAETLYAVLVAAADAL
SAARPGARRESLEEYLQRLEALERIALSFPGVETAFAVQAGREVRVIVKPEKISDAKATL
LAREIASRIEKEMNYPGQVQVTVVRETRAVEYAR
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttctggacctggttcttctgctcctggtcctggggcttgggggggttctcctc
cttaggcggaagggggaggaccgctcggcccaggaggcccgggagctcctggaggcggcg
aggcgggaggcccgggaggtcctggaggccgcgcggaaggaggcccgggacatcctggag
gccgcccgccacgaggccaaggccctgcgccaggaggcggaggcccgggccaaggcccag
cgggaggaggtggaggcggagctcaggcgccgcctcgaggccgccgaggccgaggccaaa
aagcgcctggaggaggcgggggaacgcctcaaggcggagcgggaggagcttcgcgccgag
cgggagcgcctgaggtccctccaggaggagctcaaggaggagcgggagcgcctcaaggcg
gagcgggaggagctccgccgggagggggagcggctcgccaagcgggccgaggccctggac
gccagggcggcgcggctggaggaggcggaggcggagctcgtccgcaaggaggaggcgctc
aaggcggaggccagggccctggaggagcggtttaaggaggtggagcggaggctctacgag
gtggcgggcctcacccccgaggaggcccgcaggctcgtcctggagcgcctggaccgggag
ctggaggaggagaaggcccagagggtgcgggccgccttggagcgggcccgcctcgaggcc
cggcgggaggcgcagaagatcctggcccaggccatgcagcgccaggcctcggagaccgcg
gcccagctcgccgtcaccgtggtgcccatcccctccgacgccatgaaggggcggatcatc
ggccgggaggggcggaacatccgcgcctttgaggccctgacgggggtggacctcatcatt
gacgacaccccggacgccgtcctcctctcctccttcaaccccatccgccgcgagatcgcc
cgcatggccctggaggagctcttgaaggacggccgcatccacccgagccgcattgaggag
gtggtggagaaggccaagcaggagatgaagaccttcatctacgagcgcggggaggaggcg
gccttggaggcgggggtggtgggcctgaagcccggcctcatccagcttttgggccggctc
cacttccgctccagctacggccagaacgtcctcaagcactccatccaggtggcccacctc
gccgggatcatggcggcggagctcggcctggacgccgctttggcccggcgggccgggctc
ctccacgacatcggcaagagcgtggaccgggaggtggagggaagccacgtggagatcggc
atcgccttggcgcggcgcttcggggagcccatggaggtggtggacgccatcgcccaccac
cacgaccccgacaacgccgagaccctctacgccgtcttggtggccgcggccgacgccctc
tcggcggcgcggcccggggcgaggcgggagagcctcgaggagtacctccagcgcctggag
gccctggagcgcatcgccctctccttccccggggtggagacggccttcgccgtgcaggcg
ggccgggaggtgcgggtcatcgtcaagccggagaagatcagcgacgccaaggccaccctc
ctggcccgggagatcgcgagccgcattgagaaggagatgaactacccgggccaggtccag
gtgaccgtggtgcgggagacccgggcggtggagtacgctaggtga
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