Thermus thermophilus HB27: TT_C1942
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Entry
TT_C1942 CDS
T00170
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tth
Thermus thermophilus HB27
Pathway
tth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TT_C1942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tth03400
]
TT_C1942
Enzymes [BR:
tth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TT_C1942
DNA repair and recombination proteins [BR:
tth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TT_C1942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
Zn_ribbon_PriA
Zn_ribbon_6
Trm112p
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
AAS82284
UniProt:
Q72GA6
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All DBs
Position
1849794..1851905
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AA seq
703 aa
AA seq
DB search
MALPLPLPPMSYLPPLGQEGEEALGRRVAVPFRGEVQVGVVVGEGGRPSLNLRHAIAYLD
PAPYLRPEEILFLEEAARYLFAPLGQVLADFLPPFPPLRHRVRLYPGADPKVLPPGLGAL
VDWREARGFDPKLLDLLREAGMLEEELAFREARGVLVPLKPAHPDPQLDRVLQVLRELGF
AESQAALARAAGVGVGRVRRLVQEGYIGTASPEEAAPPPADGVDVAPLHLPERPERVNGG
RFLERVRVLKGLLGEGDHLVLFPEVSLLERFLAHFPGATPYHGGLSGPVRERFFRRPRGV
VFATYGGLLLPFTPRSLVVVEEGSESYKLPSGSRAFVPPLAELRARLLGVPLTYLSLVPA
VEVLERKGFALPVPKPRLLLLDLRRERGFPVTGRALALLRQVEERGRQAVVLSARKGYSA
LLLCQDCGFRPMCPDCALPLRYHREGKGALVCHQCGHREDPPLLCPRCGSPLLAPKGPGV
DWIREALAERLSLPVYRYAGDGKDDLTPLLEGRPGVVVGTTALLRGPRLPDLALVLLPLA
DGFLLESDFRAAERYHRLLWALTELRPGRRPLLVLQTFTPEHPVHRALEAGEVEAYLWQE
KALREALNYPPRVRMVKLEVRHRKEERAREKAFALLEALRAEAEEGEVLGPAPAPVPRVK
GHYVFHLLLRGSTERLARLLGLLDRRQFRLDPDPFHFVGLLED
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtggcccttcccctgccgcttccgcccatgagctacctccctcccttggggcaggaggga
gaggaggccttggggcggcgggtggccgttccttttcggggggaggtccaggtgggggtg
gtggtgggggaaggggggcggccctccctgaacctccgccacgccatcgcctacctggac
cccgccccctacctgcgcccggaggagatcctctttttggaagaggcggcccgctacctt
ttcgcccccctgggccaggtcctggcggacttcctccccccctttccccccttgcgccac
cgggtccgcctctacccgggggcggacccgaaggtcctgcccccggggctcggggccttg
gtggactggcgggaggcccggggctttgaccccaagcttttggacctcctgcgggaggcg
gggatgctggaggaggagctcgccttccgggaggcgcggggggtgctggtgcccctgaag
cccgcccaccccgatccccagctggaccgcgtccttcaggtcctgcgggagctgggcttt
gccgaaagccaggcggccctggcccgggcggcgggggtgggggtgggccgggtgcgccgc
ctcgtccaggaggggtacatcggcaccgcgtcccccgaggaggccgccccgcccccggcg
gacggggtggacgtggcgcccctccacctccccgagaggcccgagcgggtcaacggcggg
aggtttctggaacgcgttcgggtgctcaaggggcttttgggggagggggaccacctggtc
ctcttccccgaggtgagcctcttggagcggtttctcgcccacttccccggggccacgccc
taccacggggggctttccggcccggtccgggagcggtttttccggaggccgcgcggcgtg
gtcttcgccacctacggcgggctcctcctccccttcaccccccgctctttggtggtggtg
gaggaggggagcgagagctacaagcttccctcggggagccgggccttcgtccccccgctt
gcggagcttagggcccggctcctcggggtgcccctcacctacctctccctggtgcccgcg
gtggaggttttggagcgaaaaggcttcgccctgcccgtgcccaagccccgccttctcctc
ttggacctccggcgggagcggggctttcccgtcacggggcgggccctcgccctcctccgc
caggtggaggagcgggggcggcaggccgtggtcctctccgcccgcaaggggtacagcgcc
ctcctcctctgccaggactgcggcttccggcccatgtgccccgactgcgccttgcccctg
cggtaccaccgggaggggaagggggcgctcgtctgccaccagtgcggccaccgcgaggac
ccgcccctcctctgcccccggtgcggctcccccctcctcgcccccaaggggcccggggtg
gactggatccgggaggccctggcggagaggctttcccttcccgtctaccgctacgccggc
gacgggaaggacgacctcacccccctcctcgagggccggccgggggtggtggtggggacc
acggccctcctcagggggcctaggcttcccgacctcgccctcgtcctcctccctttggcg
gacggcttcctcctggagtcggacttccgggcggcggagcggtaccaccgccttctctgg
gccctcacggagctcaggcccgggcggaggcccctcctcgtcctccagaccttcaccccc
gagcaccccgtgcaccgggccctcgaggcgggggaggtggaggcctacctgtggcaggag
aaggccctgcgggaggccctcaactacccgccgcgggtgcgcatggtaaagctggaggtg
cgccaccgaaaggaagagcgggcccgggaaaaggccttcgccctcctggaggccttgcgg
gccgaggcggaggagggggaggtcctgggccccgcccccgctcccgtgccccgggtgaag
gggcattacgtcttccacctcctcctccgggggagcacggagcggctcgcccgcctcctc
ggcctcctggaccggcggcagttcaggctggaccccgaccccttccacttcgtggggctt
ttggaggactag
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