Thioalkalivibrio paradoxus: THITH_01155
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Entry
THITH_01155 CDS
T03590
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
tti
Thioalkalivibrio paradoxus
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
THITH_01155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
ResIII
Zn_ribbon_3
HypA
DUF7801
DivIC
Motif
Other DBs
NCBI-ProteinID:
AHE97111
UniProt:
W0DFH0
LinkDB
All DBs
Position
240127..246549
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AA seq
2140 aa
AA seq
DB search
MIPSIVASELQEAIRRFLYASFPMTTPGFRRDDGGTILDDLLAEPEAIFKGPYLGLGLPF
RRMEPGATLPFERIELSFTPYRHQVRAFQRLCGPNPRSTLVATGTGSGKTECFSLPILDY
CAGRPEPGVKAVIVYPMNALAADQARRFARDIHRDRESLRGRVSVGLYVGDSGPSVHKVM
SRDSVITCRETLREYPPDILLTNYKMLDFLLLRPRDQRLWRHNEPGRLRYLVVDELHTFD
GAQGTDLACLVRRLRDRLLPGEGLACVGTSATLGGESAGQELIDYASQVFASPFDADAVV
MEDRETPEEFLAGAELRFTNWPTTGTYGGGYGEVQEAAVDNLRKLAMRWFGGDAPALDAR
DPAVAMQARFQLAERLRECRAFRELLEHAPGLLDVNAVVADWAQRFRIEPEQARQMLDSL
LALVSWARRPNDPHATSTDDPGQPFVTLRLQLWLRELSRLVANVGFRPMLRFADDLTDIA
SPLHLPVVHCRECHATGWLSVRKADEGRLETDLQAIYRTYFGNHPEMCLLFPLEGTPPAE
PKGIEGAICPQCGQLLPRAGATQCPHCKGDAPLVPVWEPNMRRTQARGDLNVQRSHHDCP
FCGAHEGLSLIGSRAASLASVLIGRLFATPYNDHRKLIAFSDAVQDAAHRAGFFGARTYS
TLIRGAIARFVTAQGEGLPLSVVASEMPRYWRNRTGSEARFVGTFIAPNMEWLRDYEYLK
TQGQLPPHSAVPGWVEQRLTWEVLQAFGLRARIGRTLERSRVAAVGPDPGALRESAARLA
QRLSEEIGSLRGIGETAVLRYLLGFLWRMRVGGAFYHPMLDGYIQDRGKPYALYRTPHMP
NYGGAAAPPALVTLNRVGRSFTALAADGRSGYADWFDKTLAVGDAVLASAEYRQVIQRVL
GQLTQDGFLIEREVGGDSVWGLDPERWICTTAVAALTCERCGHQIQVPRQELSDWTETPC
LRSPCAGIYQPSAVALPASDGTNGALHRLVAAEHTALLDSETRHMVEHSFIDGDAPWDVN
LLSATPTLEMGIDIGDLSAVLLCSVPPGQANYLQRIGRAGRRDGNALTVTLANAHKHDLY
FYADPLAMLAGEVRPPGVFLQATAVLERQLIAYCFDRWAASGIDDSAIPGNLQETLNGVE
AEAGGRFPLSLLEFVEHHRAKILRSFLGFFPDLPDESREHLGTFLFGGGGTSGMAVRLVN
RLHQLVQERKSLTARIDRLKKQKERLESQPLDDRVREELEAVLAERGALMALRRRMNGKP
TLNFFTDEGLLPNYAFPEEGVTIHSVILRRVTQAERDEGESGRRYERINFEMQRPAVAAL
SELAPMNRFYAVGRRVEIDQVDLSVSSAQEWRLCDRCHYMENVTESGDAHTVCPRCGSPQ
WADAGRKRTLLKLRQVFATADDRGSRIGDDSDQRTPAFFQRQMLVDVPLSSVGKAYRLAS
EELPFGFEYLPRVKLREVNFGQPGVESHEFAVAGELASRPGFQLCRHCGKVRRKGGRERA
SFQHAYDCKLRKPGAEESEADYFDSLYLFRELESETVRILLPLAEVGSSGTRLHSLIAAL
NLGLRRYFRGDVGHIQVAHQSEPAGGESRKHFLVLFDSVPGGTGYLKELLRQPDNLMNLL
RAAFEVVSRCECREDETRDGCYRCLLAYRESRRMDEISRKAAEEILGKILAAADTLQPID
GLASVDINALLESELEQRFVDALANAPGVTLSPQLVHGKSGFFLSVAPQGVGQRPAAWKL
EPQVQLGPGQGVAVKTKPDFVLWPVREAPGLLPVAVFMDGFQYHWNKADDDTLKRQALLD
SGRFRVWSLSWHTLPMPGMKQVNPAAQLLKTGQQATMQTLFTRLAPSGGWDPYLAYGGFI
DKGPFGWLLAYLAGGTENLDRLRFAALSRALGWLDSRSVQDPAFRNALLEDVQSRFPEAV
HAGWSGTRQDPRILGGLLPATGGDDTPMAGIDVGVCLPRSAMQAAAGGDLQGLQADIRVH
LGIDDEQARQDKDFETRWGAFWGSANLLQFLPRLTLASARGIQQGLYGVVFRMAEPSGEE
PAADDGDALQWQEIAQNSLFGEHVFGLRDAGVPPPEVGIELVDEAGAVLPEIELLWRDQR
IAVVAEVDESGRVGLERLGWTVLDGLDDRAIAELTGRLAP
NT seq
6423 nt
NT seq
+upstream
nt +downstream
nt
atgattccctcgatcgtcgcgagcgagttgcaggaggcgatccggcgctttctgtacgca
agcttcccgatgacgacgccggggttccgccgcgacgacggcggcaccatactcgacgat
ctcctcgccgagccggaggcgatcttcaagggcccgtacctcgggttgggattgccgttc
cggcgcatggagcccggcgcgacgctgccgttcgagcggatcgagctttcgttcaccccg
taccgccaccaggtcagggccttccagcgcctctgcggcccgaacccccgttccacgctg
gtcgcaaccggaaccgggtcgggcaagaccgagtgcttctcgctgcccatcctcgactat
tgcgccggccgcccggagccgggcgtgaaggcggtcatcgtgtacccgatgaacgcattg
gcggccgaccaggcccggcgctttgcccgcgacatccaccgggatcgggagagcttgcgc
ggccgggtcagcgtcggtctctacgtgggtgacagcggaccctcggtgcacaaggtgatg
agccgcgacagcgtgatcacctgccgcgagaccttgcgcgaatacccgccggacatcctg
ctcaccaactacaagatgctggatttcctgctgctgcgcccgcgggaccagcgtctgtgg
cgccataacgaaccgggccgcttgcgctatctcgtcgtcgacgagctgcacaccttcgac
ggtgcccagggtaccgatctcgcctgtctggtccgccgcctgcgcgatcgactgctgccg
ggcgaagggcttgcctgtgtcgggacgtcggcgaccctgggtggcgagtcggcgggccag
gaactgatcgactacgcctcccaggtgttcgcgagcccgttcgatgccgatgcggtggtg
atggaggatcgggaaaccccggaggagttcctggcaggcgccgagctgcgcttcacgaac
tggcccaccaccggcacgtacggtggcggctatggggaggtgcaggaggcggcggtcgac
aacctgcgcaagctggcgatgcgctggtttgggggtgacgccccggcgctggatgcacga
gacccggcggtggcgatgcaggcccgctttcagctcgccgagcggctgcgcgagtgccgc
gcgttccgcgagttgctggagcacgcaccggggttgctggatgtgaatgccgtggtggcc
gactgggcgcagcggttccggatcgagccggaacaggcgcggcagatgctcgacagcctg
ctggcactggtttcgtgggctcgccgtccgaacgatccccacgcgacgagcaccgacgat
ccgggccagcccttcgtgaccctgcgcctgcagctctggctgcgcgagctgagccggttg
gtcgcgaacgtcggattccgcccgatgctccgtttcgccgatgacctgacggacatcgca
tcgcccctgcacctgccggtggtgcattgccgcgaatgccatgcgacgggctggctatcg
gtgcgcaaggcggacgaagggcggctcgagaccgacctgcaagcgatctaccggacctat
ttcggcaatcacccggagatgtgcctgctgttcccgctggaggggacaccgccggccgag
ccgaagggcatcgagggtgcaatctgcccgcagtgcgggcaactgcttcccagggccggc
gcgacgcagtgcccgcactgcaagggcgatgccccgctcgtgccggtctgggagccgaac
atgcgccgcacgcaggcgcggggcgacctgaacgtgcagcgcagccaccacgactgcccg
ttctgcggcgcgcacgaggggctgagcttgatcggctcacgcgcggcgtcgttggcgagc
gtactgatcgggcgtttgttcgccaccccgtacaacgaccaccgcaagctgatcgcattc
tccgacgcggtacaggacgccgcgcaccgcgcaggattcttcggtgcgagaacctacagc
accctgatccgaggggcgatcgcgcgtttcgtgacggcacagggggagggcctgccgctt
tcggtggtcgcgagcgagatgccgcggtactggcgcaaccgcaccggtagtgaggcgcgc
ttcgtcggcaccttcatcgcaccgaacatggagtggcttcgggactacgaatatctgaag
acccagggtcagctcccgccgcacagcgccgttcccgggtgggtggaacagcgcctgacc
tgggaggtgttgcaggcgttcggcctgcgtgcccggatcgggcgcacgctggaacgttcc
cgtgtcgcggccgtcgggccggatccgggggcgctccgggagtccgcagcgcgcctggcc
cagcggctttcggaggagatcggctccttgcgcgggatcggtgagacggccgtgctgcgc
tacctgctggggtttctctggcgcatgcgggtgggcggtgccttttatcacccgatgctg
gatggctacatccaggatcgcggcaagccctacgcgctctaccgcacgccgcacatgccg
aactacggcggcgccgccgctccgccggcgctcgtcacgttgaaccgggtggggcggtcg
ttcaccgcactcgcggccgatgggcgctcgggctatgcggactggttcgacaagacgctc
gcggtgggcgatgcggtgctggcctctgccgaataccgccaggtgatccagcgggtgctc
ggacagctcacgcaggatggtttcctgatcgaacgggaggtgggtggtgactcggtctgg
ggtctggacccggagcgctggatctgcacgacggcggtggcggcgctgacctgcgaacgc
tgcggtcatcagatccaggtgccacgacaggagctcagcgactggaccgagacgccctgc
ctgcgcagcccttgcgcgggcatctaccagccgtccgcagtcgcattaccagcctccgac
ggcacgaacggggcgctgcaccggttggtcgccgcggagcacacagcactgctcgacagc
gagacgcgtcacatggtggagcattccttcatcgatggtgacgcgccctgggatgtgaac
ctgctctccgccaccccgacgctcgaaatggggatcgatatcggcgatctttctgcggtg
ctgctgtgttccgtgcctccggggcaggcgaactacctccagcggatcggccgcgccgga
aggcgggacggcaatgcgctgaccgtgaccctggcgaacgcacacaagcacgatctctat
ttctacgccgatccgctcgcgatgctggcgggcgaggtgcgtccgccgggcgtgttcctc
caggcgaccgcggtcctcgagcggcagctcatcgcctactgtttcgatcgctgggccgca
tccgggatcgacgattccgcgattcccggtaacttgcaggaaaccctgaacggggtcgaa
gcggaggccggcggtcgcttcccgttgtcactgcttgagttcgtcgaacaccaccgtgcc
aagatcctgcgcagctttctcggtttcttcccggatcttccggacgagtcgcgcgagcac
ttgggcaccttcctgtttggcggcgggggaacctccgggatggccgtccggctggtgaac
cggttgcaccaactggtgcaggagcgcaagagtcttacggcccggatcgatcgtctgaag
aagcagaaggaacgcctggagtcacagcctctggacgatcgggtccgggaggaactcgag
gcggtgctggccgaacgcggcgcgctgatggcgctgcgtcggcgaatgaatggcaagccc
acgctgaacttcttcaccgacgagggcctgttgccgaactacgcgttcccggaagagggg
gtcacgatccactcggtgatcctgcggcgcgtgactcaggcggagcgggatgaaggtgag
tcgggacgccgctacgagcggatcaactttgaaatgcagcgcccggcggtggccgcactg
agcgaactggcaccgatgaaccgcttctacgcggtcggccggcgggtggagatcgaccag
gtggatctctcggtgagcagcgcccaggagtggcggctctgtgaccgctgccactacatg
gagaacgtgaccgagagcggagatgcgcacacggtctgtccgcgctgcgggagtccgcag
tgggcggatgcggggcgcaaacgcacgctgctgaaattgcgccaggtgttcgcgaccgcg
gatgatcgtggcagccgcatcggcgatgacagtgatcagcgcacgccggcgttttttcag
cgccagatgctggtggacgtgcccctgtccagtgtaggcaaggcctaccggctggcatcg
gaggaactgccgttcggtttcgaatatttgccgcgggtgaagctacgcgaggtgaacttc
ggccagccgggcgtggaatcccacgagtttgcggtggccggcgagttggcctcgcggccc
gggttccagttgtgccggcactgcggcaaggtgcggcgcaaaggcgggcgcgagcgcgca
tccttccagcatgcctacgactgcaagctgcgcaagccgggtgccgaggagagcgaagcc
gactatttcgacagcttgtacctgtttcgggagctggagtccgagacggtgcggatcctg
ttgccgctggccgaggtggggtcgtcgggaacacggctgcactccctgatcgcggcgctg
aacctgggacttcgccgctacttccgcggcgatgtcggtcatatccaggtggcgcaccag
tccgagcccgccggcggcgagagccgcaagcactttctggtgctgttcgacagcgtgccc
ggcggtacgggctacctgaaggagctgctgcgccagccggataacctgatgaacttgctg
cgggcggcctttgaggtggtcagtcgctgcgagtgccgcgaagacgaaacccgcgacggc
tgctaccgctgcctgctcgcctaccgcgagagccgccggatggacgaaatctcgcgcaag
gcggcggaggagatcctgggcaagatcctggccgccgccgacaccctccagccgatcgac
gggttggcgtcggtggacatcaatgcgctgctggaaagcgagctcgagcagcgtttcgtg
gacgcgttggccaacgcgcccggggtgacgctctcgccccaactcgtgcacggcaagtcg
gggttcttcctgtcagtggccccccaaggggtagggcagcgccccgcggcctggaaactg
gaaccgcaggtgcagctcgggccggggcagggcgttgcggtgaagacgaagcccgatttc
gtgctgtggccggtgcgcgaggcgccggggctgctgccggtggccgtcttcatggacggg
ttccagtatcactggaacaaggcggacgacgacaccctgaagcgtcaggccttgctcgac
agcggccgcttccgggtgtggagtctgagctggcacacgctgccgatgccgggcatgaag
caggtcaacccggcggcgcagctgttgaagacggggcagcaggcgacgatgcagacgctg
ttcacccgactcgcgcccagcggtggctgggatccctatctggcctatggcggcttcatc
gacaagggaccatttggctggttgttggcttatttggcgggcggcacggagaacctggac
aggctgcggtttgccgcgttgtcccgggctttggggtggctggattcgcgcagcgtgcag
gaccccgcgtttcggaatgccttgcttgaggacgtgcagtcgcggttcccggaggcggtg
cacgccggttggagtggcacgcggcaggatccgagaatcctgggtggattgctgcctgca
accggcggtgacgacacaccgatggcggggatcgatgtcggcgtctgccttccacgcagt
gcgatgcaggcggccgccgggggcgatttgcaggggttgcaagcggatatccgagtgcac
ctcgggatagacgatgagcaagcccggcaggacaaggatttcgagacccggtggggcgcg
ttctggggttcggccaacctgcttcagttcctgccgcggctgacactcgcttctgctcgg
ggcatccagcaggggctgtacggcgtggtgtttcggatggcagaaccgtccggggaggag
cccgcggccgacgacggcgacgcgttgcaatggcaggagatcgcccagaattcgttgttt
ggagagcatgtgtttgggctgcgcgatgccggggtgccgccaccggaagtcgggatcgag
ctggtcgacgaggcgggcgcggtgctgcccgagatcgaactcctgtggcgggaccagcgg
attgcggtggtggcggaggtggacgaatcggggcgcgtgggcctggagcggctgggctgg
accgtgctggacggtctggacgatcgggcgattgccgaattgacgggtaggctggcgccg
tga
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