Thioalkalivibrio paradoxus: THITH_02625
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Entry
THITH_02625 CDS
T03590
Name
(GenBank) farnesyl-diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
tti
Thioalkalivibrio paradoxus
Pathway
tti00900
Terpenoid backbone biosynthesis
tti01100
Metabolic pathways
tti01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
THITH_02625
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tti01006
]
THITH_02625
Enzymes [BR:
tti01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
THITH_02625
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
THITH_02625
2.5.1.29 geranylgeranyl diphosphate synthase
THITH_02625
Prenyltransferases [BR:
tti01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
THITH_02625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AHE97350
UniProt:
W0DKD1
LinkDB
All DBs
Position
complement(543066..543932)
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AA seq
288 aa
AA seq
DB search
MEAYQKRIEAFLDRTLDPEDAPVPELIAAMRYSTLGGGKRLRPLLVYATGQAVGAPDAAL
DAIAAAVEMIHVYSLIHDDLPAMDDDDLRRGKPTCHKVYGEASAILAGDALQALAFATLL
DATAGVHADTRLGLAKELAHAAGIHGMAGGQAIDLASEGQSLNVTDLETMHRLKTGALIR
ASVLLPAQAGHADAETRARLGTYADCIGLAFQIRDDVLDVEGDPELLGKACGADSLLEKA
TFPALLGLEASRQRAAELVDEALENLQPFGTEADLLRFLARYIVERRH
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atcgaagcgtaccagaagcgcatcgaggcgttcctggaccggaccctggatcccgaagac
gcgccggttcccgagttgatcgctgcgatgcgctattcgacgctgggcggtggcaaacgg
ctgcgccccctgctggtctacgcgacgggccaggcggtgggggcacccgacgcggcgctg
gatgcgatcgcggcagcggtcgagatgatccacgtgtactccctgatccacgacgacctg
ccggccatggatgacgacgatctgcgccgtggcaagccgacctgccacaaagtctatggc
gaggccagcgcgatcctggccggcgacgcgctgcaggcgctcgcgttcgcgacactgctc
gatgccacggcgggcgtgcacgccgatacccgactcgggctggcgaaggagttggcccat
gccgcaggcattcacggcatggccggcggtcaggcgatcgatctcgcatccgagggacaa
tcgctgaacgtcaccgacctcgaaaccatgcatcggctgaagaccggcgcactgatccgc
gcctcggtgctgctgccggctcaggcgggccatgcagacgccgagacgcgggcccggctc
ggcacctatgccgactgtatcggcctcgcgttccagatccgcgacgacgtgctcgatgtc
gaaggggatccggagctcttgggcaaggcctgcggcgccgacagtctgctcgagaaggcg
acctttcccgcactgctgggcctggaggcgtcgcggcagcgggccgccgaactggtcgac
gaggcgctggaaaatctgcaaccctttggcacggaggccgacttgcttcgcttcctcgcc
cggtacatcgtggagcgcaggcattga
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