Thioalkalivibrio paradoxus: THITH_04025 Help Entry THITH_04025       CDS       T03590                                  Name (GenBank) single-stranded DNA exonuclease   KO K07462   single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Organism tti  Thioalkalivibrio paradoxus Pathway tti03410   Base excision repair tti03430   Mismatch repair tti03440   Homologous recombination Brite KEGG Orthology (KO) [BR:tti00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     THITH_04025    03430 Mismatch repair     THITH_04025    03440 Homologous recombination     THITH_04025  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:tti03400]     THITH_04025 DNA repair and recombination proteins [BR:tti03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     RecJ      THITH_04025   DSBR (double strand breaks repair)    HR (homologous recombination)     RecFOR pathway proteins      THITH_04025    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       THITH_04025 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RecJ_OB DHH DHHA1 Motif Other DBs NCBI-ProteinID:  AHE97565 UniProt:  W0DKZ2 LinkDB All DBs Position 853319..855097 Genome browser AA seq 592 aa AA seqDB search MEPLIEAFVADGGVLREAEQLGLHPVAARVLANRASRAGVAPDWLLDFALRSLDPPDGLP DIEVAAERVARAVTERETVALVTDADSDGVNASAVLSRALIHHFGHPPDRVQHYIGLKLT EGYGLSDAVCDRILESASRPRLVITADIGSSDGPRIARLAEAGIDVVVTDHHGIPAQGGP DAALAFVNPQRPDSRYPDPLIAGVMVAWLLLWATRRHLIARGRLRADSPSLRELFGWVAT GTVADVVSLARSRNNRIVVRAGIDQIEAGTYPCWRALRPHLGDAAKPLDASDLAFGIGPR LNAAGRLHDAMAGVHFLLAPDDATAVDRVAVLNQTNETRRAIEKRLTAEALEVAREQLRQ GRCALVVFLTDGHAGVQGIVASRIMQAFGRPGVCLSARPDAPAVLAGSCRSIDGLSMLDT LQALACNEPGLFLSYGGHAGAAGLTLRQERLADFEAAFESEVAHRLRGQVLRPRILIDGD VPAGGIDWALLEGLAAIGPYGREFPEPVFRSQFTVLEAREVGAAGGHWRLALRHGGVRLG GIWFGAGRDAPVRPGEVVPLVFTPEANWWQGQRRLQIRVLARDRSVAHAAAS NT seq 1779 nt NT seq  +upstreamnt  +downstreamnt atggaacccctgatcgaggcgttcgtcgccgatggcggcgtgttacgagaggccgagcag ctcgggctgcacccggtggcggcacgcgtgctggccaatcgcgcgagccgggcgggggtt gcacccgactggctgctggatttcgccctgcgttcgttggatccccccgatggtctgccg gacatcgaagtggccgcagagcgggtggcgcgtgcggtgacggagcgggagaccgtcgcg ctggtgaccgacgccgattccgacggggtcaacgccagtgcggtgctcagccgcgccctg atccatcacttcggccatccgccggaccgggtgcagcactacatcggcctgaaactgacc gagggctatgggctgtcggacgcggtctgtgatcgcattctagagtccgcatcccgcccg aggctggtgatcaccgcggatatcggctcgtccgacgggccccggatcgcccggctggcc gaggcagggatcgatgtggtggtcaccgatcatcatggcattcccgcgcagggtggaccg gacgcggcgctggcgttcgtgaacccccagcgtccggactcgcgttacccggatccgctg atcgcgggggtgatggtggcgtggctgctgctctgggcgacccgccggcacctgatcgcg cgcggtcggctgcgcgccgacagccccagcctgcgcgaactgttcggctgggtggccacc gggaccgtggccgacgtcgtctcgctggcgcgtagccgcaacaaccgcattgtggtgcgc gcaggaatcgatcagatcgaagccggcacgtacccttgctggcgggcgctgcgcccgcat ctcggggacgcggcgaaaccgctcgacgcctcggacctcgcgttcgggatcggtccaagg ctgaacgcagccgggcgcctgcacgacgcgatggcaggcgtgcactttctgctcgcgccg gacgatgcgacggcggtggatcgcgtggcggtgctgaaccagaccaacgagacccggcgg gcaatcgagaaacgactgaccgccgaagcactggaggtagcgcgggaacagctgcggcag gggcgctgtgcgctggtggtgttcctgaccgacggccatgccggtgtgcagggaatcgtg gcgtcgcggatcatgcaggccttcgggcggcctggcgtgtgcttgtcggcgcgtccggac gcacccgcggtgctggcgggttcgtgcagaagcatcgatggcctgtcgatgctcgacacg ctgcaagcccttgcctgcaacgagccgggattgtttctgagctacggcggacatgccggg gccgcgggtctgacgctccggcaggaacgcctcgcggacttcgaggcagcgttcgagtcc gaagtggcgcaccgcctgcgcggtcaggtgctgcgtccgcggatcctgatcgatggcgac gttcccgccggcggcatcgactgggcgttgctggaggggctggccgcaatcggtccctac ggccgggagtttcccgagccggtgttccggtcgcagttcacggtgctggaggcccgcgag gtcggtgctgccggagggcattggcgcctggcactgcggcatggcggggtgcgcctcggc ggcatctggttcggcgctggccgggacgctcctgttcgccccggagaggtcgtgccgctt gtattcacacccgaggcgaactggtggcaagggcagcgccggctgcagattcgcgtgctt gcgcgcgaccggtcggtggcgcacgctgcggcatcctga

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