Thioalkalivibrio paradoxus: THITH_04325
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Entry
THITH_04325 CDS
T03590
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tti
Thioalkalivibrio paradoxus
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tti03400
]
THITH_04325
Enzymes [BR:
tti01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
THITH_04325
DNA repair and recombination proteins [BR:
tti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
THITH_04325
Prokaryotic type
THITH_04325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AHE97612
UniProt:
W0DK47
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All DBs
Position
complement(911874..913337)
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AA seq
487 aa
AA seq
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MTATLVWLRRDLRLADQPALLAAVERGAPVVPVFVHAPEEEAPWQPGAASNWWLHHSLAR
LSEALERRGSRLILRRGPTLETLRELVQETGADAVFWNRLYEPAVIRRDRQIKRRLRESG
LRVESFNAALLHEPWCIRSGSGDPYRVFSPFWKSCRQAGIDGTPLPEPEALPAPPTAAAR
PGAAPWPGSESLDALGLLPELRWDAGLDRTWTPGEAGAHRRLHDFLENSAERYHRLRDLP
GQPGTSRLSPHLHFGEISPRQIVRALRDAGLDPDSGSAEPFLREIGWREFAHHLLFHFPH
TTEAPLNPRFEAFPWRESERDLRAWQQGRTGIPIVDASMRELWQTGWMHNRSRMIVASLL
TKNLRMHWLHGARWFWDTLVDADLASNTLGWQWTAGSGADAAPYFRIFNPVLQGERFDPD
GRYVRRYVPELERVPASAIHTPRGGRGRAADPALALGYPPPIVDLRESRQAALEAFRRLP
TPGAGRS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgacgctggtctggctgcgccgtgatctgcgcctggcggaccagccggcgctg
ctcgcggccgtggaacgcggggcaccggtggttccggtgttcgttcacgccccggaggaa
gaagccccctggcagcccggtgccgcgtcgaactggtggctgcatcacagtcttgcgcgc
ctgtccgaagcgctggagcgccgcggcagccggctgatcctgcgccgcggccccactctg
gagacgctgcgcgagctggtgcaggaaaccggggccgacgcggtgttctggaaccgcctc
tacgagcccgcggtgatccggcgcgaccggcagatcaagcgccgcctgcgggaatcgggt
ctgcgggtcgagagcttcaatgccgcgctgctgcacgaaccctggtgcatccggtccggc
agcggcgacccctaccgggtgttctcgccgttctggaaatcctgccggcaggcgggcatc
gacggcacgccgctgccggaacccgaggccctcccggcacctcccacggcggcagcacgc
cccggtgccgcaccctggcccgggtcggagtcgctcgacgcgctcggcctgctgcccgag
ctgcgctgggacgccggcctcgaccggacctggacacccggggaagccggagcgcaccgc
cgcctgcacgactttctcgaaaactcggcggagcggtaccacaggctgcgcgatctgccc
gggcagccgggcacgtcgcggctgtcgccgcacctgcacttcggcgagatctcgccgcgc
cagatcgtgcgcgcgctgcgcgacgcggggctcgacccggattcgggcagtgctgagccg
ttcctgcgcgagatcggctggcgcgagttcgcgcatcacctgctgttccacttcccgcac
accacggaagcgccgctgaacccgcgtttcgaggcgtttccctggcgcgaatcggagcgg
gatctgcgggcctggcagcagggccggaccgggatcccgatcgtcgacgccagcatgcgc
gaactgtggcagaccggctggatgcataaccgcagccggatgatcgttgcttcgctgctc
acgaagaatctgcgcatgcactggctgcacggcgcacgctggttctgggacacgctggtc
gatgcggatctcgcctcgaacacgctgggctggcagtggaccgccggtagcggtgccgac
gccgcaccctacttccggatcttcaacccggtgctgcagggcgaacggttcgaccccgac
ggccgctacgtgcgccgctacgttcccgaactggaacgggtgccggccagcgcgattcat
accccccgcggcggccggggacgggcggcggaccccgcgctggcgctgggctatccgccc
ccgatcgtcgacctgcgggagagccggcaagcggccctggaagccttcaggcgattgccg
acgcccggtgccggccggtcttga
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