Thioalkalivibrio paradoxus: THITH_04475
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Entry
THITH_04475 CDS
T03590
Name
(GenBank) peptide ABC transporter ATPase
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
tti
Thioalkalivibrio paradoxus
Pathway
tti02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
THITH_04475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tti02000
]
THITH_04475
Transporters [BR:
tti02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
THITH_04475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_16
AAA_22
nSTAND1
RsgA_GTPase
Mg_chelatase
MMR_HSR1
AAA_29
AAA_33
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AHE97639
UniProt:
W0DG65
LinkDB
All DBs
Position
complement(939164..940174)
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AA seq
336 aa
AA seq
DB search
MSAEPSTMPPPPSGPVLAVHDLHTWFDLRQWGFLRVGSVRAVDGVSFELGRSESVAFVGE
SGCGKSSLARTLLGLHPPTRGEVVFEGRPLQAMRPSERNDYLARVGYVQQDPYGALPPFM
DVRRILHEPLIVHGVRDRSERDRRALEVLEEVRLTPPEDFLAKFPHMLSGGQQQRVVIAR
ALILRPQVIIADEPVSMLDASVRVEILQLLRQIQQEYGLTLAFITHDLSTVRHFAERIFV
MYAGRIVEQAAVDDLLNHPQHPYTQALLAAIADPDPGNAETERAVPPGEAPSLLNPPAGC
RFHPRCAQRIQGTCDRDDPPDFEPRPGHRTACWLHR
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgaaccgtccacgatgccgccgccaccgtccggccccgtgctggccgtgcac
gatctgcacacctggttcgacctgcgccagtggggattcctgcgcgtgggttcggtgcgc
gcggtcgacggagtcagcttcgaactcggccgcagcgagtcggtggccttcgtcggcgag
agcggctgcggcaagagttcgctcgcccggacattgctgggcctgcacccgccgacccgc
ggcgaggtggtgttcgagggccgcccgctgcaggccatgcgcccctcggaacgcaacgat
tatctcgcgcgcgtcggctacgttcagcaggatccgtacggcgcactgccgccgttcatg
gacgtccgccgcatcctgcacgagccgctgatcgtgcatggcgtgcgtgaccgcagcgaa
cgcgaccggcgcgcgttggaagtgctcgaggaggtgcgcctgacaccgccggaggacttc
ctggcgaagttcccgcacatgctgagcggcggccagcagcagcgcgtggtgatcgcacgg
gcgctgatcctgcgcccgcaggtgatcatcgccgacgaaccggtgtcgatgctcgacgcg
tcggtgcgcgtcgaaatcctgcagctgctgcgccagatccagcaggaatacggcctgact
ctggcgttcatcacccacgacctctccacggtacgccatttcgcggaacggatcttcgtg
atgtacgccgggcggatcgtcgagcaggcagcggtcgacgatctgctgaaccacccgcag
catccgtacacacaggcgctgctcgccgcgatcgccgatcccgacccgggcaacgcggag
acggagcgcgcagtcccgccgggcgaagcgcccagcctgctgaacccgcccgccggctgc
cggttccacccgcgctgcgcgcagaggatccagggtacctgcgaccgcgacgatccgccc
gacttcgaaccacgccccgggcaccgtaccgcctgctggctgcatcgctga
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