KEGG   Thioalkalivibrio paradoxus: THITH_07005
Entry
THITH_07005       CDS       T03590                                 
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
tti  Thioalkalivibrio paradoxus
Pathway
tti00061  Fatty acid biosynthesis
tti00071  Fatty acid degradation
tti01100  Metabolic pathways
tti01212  Fatty acid metabolism
tti02024  Quorum sensing
tti04146  Peroxisome
Module
tti_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:tti00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    THITH_07005
   00071 Fatty acid degradation
    THITH_07005
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    THITH_07005
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    THITH_07005
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:tti01004]
    THITH_07005
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tti04147]
    THITH_07005
Enzymes [BR:tti01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     THITH_07005
Lipid biosynthesis proteins [BR:tti01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   THITH_07005
Exosome [BR:tti04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   THITH_07005
  Exosomal proteins of breast cancer cells
   THITH_07005
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 AMP-binding_C
Other DBs
NCBI-ProteinID: AHE98045
UniProt: W0DMC3
LinkDB
Position
complement(1453572..1455464)
AA seq 630 aa
MNSLRSLHPPTRARVAPQPGISRPRPAEPRHIRHAREATLDAEFRERVRRSPNAVAHIEY
DSDQVWRGYSWTDCAGEVGRWQHALAGLGLAPGDRLAILLRNCRHWVIFDQAALGVGLVT
VPLYTNDRPANIEYILQDSGARVLLLEDAAAWERLGSIRSTLDRLDAVIALHGPGRATVA
NLYPAERWLPDAGPQSAGGITRPDTLASIVYTSGTSGRPKGVMLSHRNFLSNAHACLDAV
AVSSADRLLSFLPLSHTLERTVGYYAAVSAGIATAYARSVTRLAEDLVQVRPTILIAVPR
VFERMHARILGHVSAASPTRRRLFDRAQELGWRRFLHAQRRGRWSPALLLHPLLDPVVGA
RVRARLGGRLRFAISGGAPLPEAVGRFFIACGVPVLQGYGLTETSPVIAVNRLEDNEPAT
VGPALPGVEVRIGEHDELCTRSPSVMAGYWNDRHATRAALDADGWLHTGDQARIGPRGHI
TITGRLKDILVLSNGEKVAPADVEQALAGTPWVEQVMVIGEGRPFLAALVVLRAGALPGL
ARAAGLDPAPAATHDGARTLRRKPAVVAEVLKALQPRLAQFPGYLQLRAAVLVDEPWTVA
NGLLTPTLKLRRGEILERCRDRVEALYQGR
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgaacagcctcaggtcattgcatccgccgacccgggcgagagtggccccgcaacccggc
atctcccggccccggccagccgaaccgcggcatatccggcacgcccgggaggcgacgctg
gatgccgaattccgtgagcgggtacgacgcagtccgaatgccgtcgcacacatcgagtac
gactcggatcaggtttggcgcggatacagctggaccgactgcgcgggcgaagtgggccgc
tggcagcacgccctcgcgggtttgggactggcgccgggagaccggctcgcgatcctgctg
cggaactgcaggcactgggtgatcttcgaccaggcggcgctgggggtggggctggtcacg
gtcccgctgtacaccaacgaccgcccggccaacatcgaatacatcctgcaggattccggt
gcgcgcgtgctcctgctcgaggacgccgcggcctgggagcgcctcggttcgatccgctcg
acgctggaccgcctcgatgcggtgatcgcattgcacggccccgggcgggccacggtcgca
aacctgtacccggcggagcggtggcttccggacgcaggaccgcaatccgcgggcggcatc
acccgccccgatacgctcgccagcatcgtctatacctcgggcaccagcgggcgaccgaag
ggtgtgatgctgtcccaccgcaattttctgagcaatgcccatgcctgcctggacgccgtt
gcggtatccagcgccgaccgcctgctgtcgttcctgccgctgtcgcacacactcgagcgc
accgtcgggtattacgccgcggtctcggccggaatcgcgaccgcctacgcccggtcggtc
acccggctggccgaggatctggtgcaggttcggccgacgattctgatcgcggtgccccgg
gtcttcgaacgcatgcacgcgcggatcctggggcacgtgtcggcggcttcgccgacccgg
cgccggctgttcgaccgggcgcaggagcttggctggcgccgcttcctgcacgcgcagcgg
cgcggtcgctggtcgcctgcgctgctgctgcatccgctgctcgacccggtggtcggcgcc
agggtccgcgcccgactcggcgggcggctgcgtttcgcgatcagcggcggtgccccgctc
cccgaagcggtcggcaggtttttcatcgcctgtggcgtgccggtactgcaggggtacggc
ctgacggaaaccagtccggtgatcgcggtgaaccggctcgaggacaacgaacccgcgacc
gtgggtccggcgctgccgggggtcgaggtccgcatcggcgaacacgacgagctctgcacc
cgaagcccgtcggtgatggcgggctactggaacgaccggcacgcgacccgcgcggcgctc
gacgccgacggttggctgcataccggtgaccaggcgcgtatcggccctcgggggcatatc
accatcaccgggcggctgaaggacatcctggtgctgtccaacggcgagaaggtggcgccc
gccgacgtcgagcaggcgctggccggcacgccctgggtcgagcaggtgatggtgatcggc
gaggggcggccgtttctcgccgcactcgtggtgctgcgcgcgggcgcgctgcccggactg
gcacgcgccgccggtctcgacccggcccctgccgccacgcacgacggcgcccgcacgctg
cgccgcaagccggcggtggtggccgaggtgctgaaagcgctgcagccccggctggcacag
ttcccgggctatctgcagctgcgtgccgcggtgctggtcgacgagccctggacggtcgcg
aacgggctgttgacgccgacgctgaaactgcgccgcggcgagatcctcgagcgctgccgc
gaccgcgtcgaagccctgtaccaaggccgttga

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