Thioalkalivibrio paradoxus: THITH_07860
Help
Entry
THITH_07860 CDS
T03590
Name
(GenBank) pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
tti
Thioalkalivibrio paradoxus
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tti03009
]
THITH_07860
Enzymes [BR:
tti01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
THITH_07860
Ribosome biogenesis [BR:
tti03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
THITH_07860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
Motif
Other DBs
NCBI-ProteinID:
AHE98189
UniProt:
W0DHW3
LinkDB
All DBs
Position
1647880..1648839
Genome browser
AA seq
319 aa
AA seq
DB search
MEHQQGPRVLSVPPQAEGQRLDNFLLRHLRGIPRSLVYRLVRKGAIRINGRRAKAETRVA
GGDQVRVPALHGPARPDAAAIPEGVLQILRKSILFEDDDYLVLDKPAGLAVHGGSGLAFG
LIEAMRELRPGVALELGHRLDRETSGCLILTRSRRALTAFHSALRSGGVEKRYLALLAGR
WQGGPRHCDLPIARGRDDSGRRRMRTPDRDDGDAARTATSLFTPLERFGDFTLMEVNIGT
GRTHQIRVHASALGHPVAGDHEYGDAEANRSARAAGLRRMFLHAQAIRFPDWRGESQLYS
SPLPSDLQSVLDALAGGVR
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaacatcagcaagggccacgcgtgttgtcggtgcctccccaggccgagggacagcgg
ctcgacaatttcctgctccggcatctccgcggcattccccgaagcctcgtctatcgcttg
gtgcgcaagggtgcgattcgtatcaatggccgtcgcgccaaggccgagacacgggtcgcc
ggcggcgaccaggtgcgtgtaccggcgctgcatgggccggcacgcccggatgccgctgcg
atcccggaaggtgtgctgcagatcctgcgcaagtcgatcctgttcgaggacgatgattac
ctggtactggacaagccggccgggctggcggtgcacggcggtagcggcctcgcgttcggg
ctgatcgaggcgatgcgcgaactgcggcccggggttgcgctggaactgggacaccgcctc
gatcgcgagaccagcggctgcctgatcctgacccggagccggcgggcgttgaccgcgttc
cattcggcgttgcggagcggtggtgtggaaaagcgctacctcgcgctgctggcggggcgc
tggcagggcggcccacggcattgcgatttgccgattgctcgggggcgagacgactcggga
cggcggcgaatgcgcaccccggatcgggacgacggagacgccgcccggactgcgacgagt
ctgttcaccccgctggagcgtttcggggatttcacgctgatggaggtgaacatcggcacc
ggcagaacgcaccagatccgggtgcatgcaagcgcgctgggccaccccgtggccggggat
cacgagtacggcgacgccgaggcgaatcgcagcgcgcgcgcagccggcctgcggcgcatg
tttctgcacgcgcaggcgatccgctttccggactggcggggcgagagccaactgtattcc
agccccctgcccagcgacctgcagtcggtgctcgatgccctggccggtggtgtccgatga
DBGET
integrated database retrieval system
