Thioalkalivibrio paradoxus: THITH_07975
Help
Entry
THITH_07975 CDS
T03590
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
tti
Thioalkalivibrio paradoxus
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tti03032
]
THITH_07975 (ihfB)
03036 Chromosome and associated proteins [BR:
tti03036
]
THITH_07975 (ihfB)
03400 DNA repair and recombination proteins [BR:
tti03400
]
THITH_07975 (ihfB)
DNA replication proteins [BR:
tti03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
THITH_07975 (ihfB)
Chromosome and associated proteins [BR:
tti03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
THITH_07975 (ihfB)
DNA repair and recombination proteins [BR:
tti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
THITH_07975 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-DNA_bdg
TetR_C_30
CATASP
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AHE98211
UniProt:
W0DII1
LinkDB
All DBs
Position
1675979..1676278
Genome browser
AA seq
99 aa
AA seq
DB search
MTKSELIERLAEKTPHLPAKDVELCVKAVLERMSQALAHGDRVEIRGFGSFSLHFRPPRI
GRNPKTGKGVALAGKHVPHFKPGKELRERVNQAFVQSDP
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcggagttgatcgaacggctcgcggaaaagactccccatctgcccgccaag
gacgtcgaactctgtgtgaaggcggtgcttgagcgcatgagccaggccctcgcccatggc
gaccgggtggagatccgcggcttcggcagtttctcgctgcattttcgtccaccgcggatc
ggccgcaacccgaagaccggcaagggcgtggcgctcgcaggcaaacatgtcccgcatttc
aagccaggcaaggagttgcgggaacgcgtaaaccaggccttcgtgcaatcggacccgtga
DBGET
integrated database retrieval system
