Thioalkalivibrio paradoxus: THITH_08235
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Entry
THITH_08235 CDS
T03590
Name
(GenBank) hypothetical protein
Organism
tti
Thioalkalivibrio paradoxus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WD40_CDC20-Fz
NNH6
Beta-prop_EML_2
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR75_1st
Pentapeptide
Pentapeptide_4
NACHT
Pentapeptide_3
Beta-prop_RIG_2nd
TIR_2
Beta-prop_Nup120_160
Nbas_N
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_VPS8
PROPPIN
eIF2A
PQQ_2
Cytochrom_D1
NPHP3_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHF00060
UniProt:
W0DN86
LinkDB
All DBs
Position
1724893..1728720
Genome browser
AA seq
1275 aa
AA seq
DB search
MDVLDADDVRGYLDDLREHLTPLRFERLHRIAGLLGQDRHVAVADVLAKLYPDTPHENAS
TDLRKLRAALDEAAAEVGVNFSCKVSSERRGGAVNRRLWFEGTPRLAERAQRFSHAETGE
LNHLPATLRQRGRVLGPTIALDEYRDGKPVARWFLSYARDDNTMKERLLKLLQKRLACSR
RFAFESWHDGDIVLGDDWHESIEQVLDQCHFGLLLLSHAFLSSDFIRDVELPRFVNTDGG
IGEEKRAVPVCLEKMNFGRVDLHGLGQKQIFRDQDDKSFKERKGHLQEAWVDQLVDRIET
MLERYGVAFPGGSEPIVQRVGRLSRSAGLHRAIHRFPTADLMGLRDMQDAESVLLETAQA
QVAGLEKDSIDPSDSPGVDALEYLLDWLHDADAPPLFALLAEYGMGKTITCQRLVRALED
ERRNDPQLPVPIYLDLRNLTGLNQGVPMLEAIVNECIRRGWQHDIDGPAMDFVQVRSLAR
DGALVIFDGLDEALVHLSESDGQVFTRELLKVLSFPTEQGPGARKPRLLISCRTHYFRTL
REQKNHFTGQERGEVRANDYRALVLLPFTEEQVAEYLARALPGADVHQLQGLIASVHNLT
ELTRRPYTLRLVAEFIPEIENWRAQGKRVYGVTLYRRMVQRWLERDSGKHVLKPAHKMRL
MPHLAATLAREGQRLLPVARLESWFTRFLADEPDLKERYAGVDRDKLEEDLRTATFLVRQ
DGSGEDDGAFRFAHSSMHEFFLADYLFQALRADDPEAWAMPMPSRETLDFLGQMLAETDD
AQLLQRISGWRRTYREHTSEILLAYALLARERGWPEPVLRGMDLRGARLHGWSIGVGQGE
PLDLAEADFTGADLRESRWQRVNLRGACFRDADLAGSEWVSVAAEAAVFENADLTGSRWR
DADLSDCRFEDAETYRMQWMHCRSPGVKGLADDGVIAVLNIPAERPLPALRSTQPQSDLG
VVGFSACVFSPDGTRLVSAGRDGTLRVWDAASGESLRTLRGHEGGVLFCAVSPDGARLVS
AGDDGTLRVWDAASGESLRTLRGHEGRVLFCAVSPDGARLVSAGVDGTLRLWDAASGESL
RTLRGHEGGVSSCAFSPDGTRLVSAGLYGRLRVWDAASGENLRTLRGHKCWVASCAFSPD
GAWLVSAGWDGTLRVWDAASGESLRTLRGHEGGVRSCTFSPDGAWLVSAGEGRHAAGMGC
GERGESAHIARAQRLGCVLRVFAGRRSAGIGGDGRHAAGLGYGERGESAHIARARGLGAV
LRVFAGRRSAGIGGG
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggatgttctcgatgcggatgatgtgcgcggctacctcgatgatctgcgggaacacctg
acgccgctgcgtttcgagcgcctgcaccggatcgccggcctgctgggtcaggatcgccat
gtggcggtcgccgatgtacttgcgaaactctatcccgataccccgcacgagaacgcgagc
accgatctgcgcaagctgcgggccgcactggacgaggcggctgcggaagtcggcgtgaat
ttctcctgcaaggtgtcctccgaacggcgcggcggggcggtaaaccgacggctttggttc
gagggtacgccccggctggcagagcgggcgcagcgcttctcacatgccgagaccggcgag
ttgaatcacctgcccgcgacgctgaggcaacgcgggcgggtcctgggtccaacgattgcc
ctggatgaataccgcgatggtaaaccggtggcgcgctggtttctgagctacgcccgcgac
gacaacacgatgaaggagcgcttactgaaactacttcagaagcggctcgcgtgttcgcgt
aggttcgctttcgagtcctggcacgacggcgacatcgtattgggcgacgactggcacgag
agcatcgaacaagtgctcgatcagtgccacttcggtcttctgctgctgagccacgcgttt
ctgtccagcgatttcatccgtgacgtggaactgccccggttcgtgaacacggacggcggg
attggcgaggaaaagcgcgcagtgcccgtctgcctggaaaaaatgaatttcggtcgagtc
gatctgcacgggctcggacagaagcagatattccgcgaccaggacgacaagtccttcaag
gaacgcaaagggcatttgcaggaagcgtgggttgaccaactggttgatcgtatcgagacc
atgttggagcggtacggggtcgccttccccggtggctcggagcccatcgtgcaacgtgtc
ggccggttaagccgcagcgctggtttgcatcgagcgattcaccgtttcccaacggctgat
ctcatgggtctgcgcgacatgcaggatgcggaatccgtgctactggagaccgcgcaggca
caagttgcggggctggagaaagactccattgacccttccgattctcctggcgtcgatgca
ctcgaatacctgctcgactggctgcacgatgccgatgccccgccgttgttcgcacttctc
gccgagtacgggatgggcaagacgatcacctgccagcgcctggtacgcgcgctggaggac
gaacgccggaacgacccccagctcccggtgccgatctatctcgatctgcgcaacctcacc
gggctcaaccagggcgttccgatgctcgaagcgatcgtgaacgaatgcatccgccggggc
tggcagcacgatatcgacggcccggcgatggatttcgtacaggtacgcagcctggcccgc
gatggggcactcgtgatcttcgacgggctggacgaggcactggtgcacctgagcgagagc
gacggccaggttttcacccgcgaactgctgaaggtgctttcctttccgacggagcagggc
cccggtgcccggaagccgcgtctgctgatctcctgccgcacgcactacttccgcacgctg
cgcgagcagaagaatcacttcaccggccaggaacgtggcgaggtccgcgcgaacgactac
cgcgcgctggtgctgctgccgttcaccgaggaacaggtcgccgaatatcttgcccgggcg
ctgcccggtgccgatgtgcaccagctccaggggttgattgcgtcggtgcataacctcacc
gaactcacgcgccgcccgtacaccctgcgcctggttgccgagttcatccccgagatcgag
aactggcgcgcacaggggaagcgtgtttacggggtaacgctgtaccggcgcatggtgcag
cgctggctggagcgcgacagcggcaagcatgtgctgaagcccgcgcacaagatgcggctg
atgccgcacctcgccgccacgctcgcacgcgagggccagcggctgctgccggtagcgcgc
ctggagtcctggttcacgcgctttctggccgacgagccggacctgaaggaacgctacgcc
ggagtcgaccgcgacaagctcgaggaagacctgcgcaccgcgaccttcctggtgcgccag
gacggttccggcgaggacgacggcgcgttccgtttcgcgcacagctcgatgcacgaattc
tttctggccgactacctgttccaggccctgcgggcggacgaccccgaagcctgggcgatg
ccgatgcccagccgcgagaccctcgacttcctcgggcagatgctggccgagaccgacgac
gcgcagcttctgcagcgcatctccgggtggcgccgcacctaccgcgagcacaccagcgag
attctgctggcctatgcgctgctggcacgtgaacgcggctggcccgagccggtgctgcgt
ggcatggatctgcgtggcgcacgcctgcacggctggtcgatcggcgtggggcagggcgag
ccgctcgacctcgcggaggccgacttcaccggcgcggacctgcgcgagagccgctggcag
cgggtgaacctgcgcggggcctgttttagagatgccgatctggcgggcagcgagtgggta
tcggtggcggcggaggctgcggtgttcgagaacgctgacctcacgggcagccgctggcgg
gacgcggatctgtcggactgccggttcgaagatgccgagacctaccggatgcagtggatg
cactgccgttcgccgggggtgaaggggctggccgatgacggcgtgatcgccgtgctgaat
atcccggcggagaggccgttacctgcgctgcgttcaacgcagccgcaaagcgacctggga
gtcgtcgggttttccgcctgcgtgttttcgccggacggcactcggctggtatcggcgggg
agggacgggacgctgcgggtatgggatgcggcgagcggggagagtctgcgcacattgcgc
gggcacgagggtggggtgctgttctgcgcggtttcgccggacggtgctcggctggtgtcg
gcgggggatgacgggacgctgcgggtgtgggatgcggcgagcggggagagtctgcgcaca
ttgcgcgggcacgagggtagggtgctgttctgcgcggtttcgccggacggtgctcggctg
gtgtcggcgggggtggacggcacgctgcggctatgggatgccgcgagcggggagagtctg
cgcacattgcgcgggcacgagggtggagtgtcgtcctgcgcgttttcgccggacggcact
cggctggtgtcggcggggctgtacggcaggctgcgggtgtgggatgcggcgagcggggag
aatctgcgcacattgcgcgggcacaaatgttgggttgcgtcctgcgcgttttcgccggac
ggcgcttggctggtgtcggcggggtgggacggcacgctgcgggtgtgggatgcggcgagc
ggggagagtctgcgcacattgcgcgggcacgagggtggggtgcggtcctgcacgttttcg
ccggacggcgcttggctggtgtcggcgggggagggacggcacgctgcgggtatgggatgc
ggcgagcggggagagtctgcgcacattgcgcgggcacaaaggttgggttgcgtcctgcgc
gttttcgccggacggcgctcggctggtatcggcggggatggacggcacgctgcgggtctg
ggatacggcgagcggggagaatctgcacacattgcgcgggcacgaggactgggtgcggtc
ctgcgcgttttcgccggacggcgctcggctggtatcggcgggggatga
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