Thioalkalivibrio paradoxus: THITH_10620
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Entry
THITH_10620 CDS
T03590
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tti
Thioalkalivibrio paradoxus
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tti03016
]
THITH_10620
Enzymes [BR:
tti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
THITH_10620
Transfer RNA biogenesis [BR:
tti03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
THITH_10620
Prokaryotic type
THITH_10620
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
AHE98622
UniProt:
W0DMY6
LinkDB
All DBs
Position
complement(2280872..2281891)
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AA seq
339 aa
AA seq
DB search
MTPQFQTHLVNGTTGDPVLYVDFLFQRRALLFDLGEIVALSPRQVLRVTDVFVSHAHMDH
FIGFDTMLRLMLGRSKRLRLYGPPDFLDRVAHRLLGYTWNLVHNFAVELVIEAVERWPDG
ELRRARFRSSRAFAREEMPAATASDGVLLDEDDFRVRAVPLDHNGIVSLAFALEEKAQLN
VWKSRLDELGLPTGPWLTELKQRVRRGDADDTALTIRWRDRHGEHQRAEPLGLLRREVLR
EVPGQTIAYVVDAAFHGANRCAIVSLARYADRFYVETPFLNESAERAAETGHLTAGQAGW
LAREAGVKRLIPFHFSSRHTGQEILIEEQAKAAFAGETA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacaccccagttccagactcacctggtcaacggcaccaccggtgacccggtgctctac
gtcgacttcctgtttcagcgccgcgcgctgctgttcgacctcggtgagatcgtggcgttg
tcaccccgccaggtgctgcgcgtcaccgatgtgttcgtatcgcacgcgcacatggaccat
ttcatcggcttcgacacgatgctgcggctgatgctggggcggtcgaagcgactgcggctt
tacgggccaccggacttcctggaccgggtcgcgcaccggctgctcggctacacctggaac
ctggtgcacaactttgcggtggaactcgtgatcgaggcggtcgaacggtggccggacggc
gagctgcgccgggcccggttccggtcctcccgcgcgttcgcccgtgaggaaatgcctgcc
gcaacggcctcggacggcgtactgctcgacgaggacgacttccgggtacgggctgtgcca
ctggatcataacgggatcgtctcgctggcgttcgcgctggaggagaaagcgcagctgaat
gtctggaagagccggctggacgaattggggctgccgaccggcccatggctgaccgagctg
aagcagcgagtgcgccggggcgacgcagacgatacggcgctgacgattcgctggcgtgac
cgtcatggcgagcaccagagagcggagccgctgggtctgctgcgccgcgaggtgctgcgc
gaggtgccgggccagacgatcgcctacgtggtcgatgcggccttccacggggccaaccgg
tgcgcgatcgtgtcgttggcccgctacgcggaccggttctatgtcgagactccgttcttg
aacgagtccgccgaacgcgcggcggagaccggccacctgacggccgggcaggccgggtgg
ctggcgcgagaggcgggggtcaaacgcttgatcccgttccacttctcgtcccggcacact
gggcaggagattctgatcgaggaacaggcgaaagccgcattcgccggcgaaacggcctga
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