Thioalkalivibrio paradoxus: THITH_11235
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Entry
THITH_11235 CDS
T03590
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
tti
Thioalkalivibrio paradoxus
Pathway
tti03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
THITH_11235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tti03400
]
THITH_11235
Enzymes [BR:
tti01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
THITH_11235
DNA repair and recombination proteins [BR:
tti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
THITH_11235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AHE98723
UniProt:
W0DP13
LinkDB
All DBs
Position
2414873..2415493
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AA seq
206 aa
AA seq
DB search
MPIPEYWERACADLAGTDPVMAALIARYPDAVLTTRGDPFQTLARAIVGQQISVKAADSV
WQRFAAFVGSVRPEQIVVLELESLAACGLSRRKAEYLRDLAGHFVDGRIQPARWESMTDE
AVIAELVDVRGIGRWTAEMFLIFNLLRPDVWPVDDIGLQKAVALHYLDNERPTPRTLRRH
GERHAPWRTVATWYLWRSLDPTVVLY
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgccgatacccgagtactgggagcgcgcctgcgcggatcttgccgggactgacccggta
atggccgcgctgatcgcgcgctatcccgacgcggtgctgacgacccgtggcgacccgttt
cagacgctggcgcgcgcgatcgtcgggcagcagatttcggtgaaggccgccgacagcgtc
tggcagcggttcgcggcgtttgtgggctcggtccggccggagcagatcgtggtactggag
ctggagtcgctggcggcctgcggcctgtcgcggcgcaaggccgagtatctgcgggatctg
gctggccacttcgtcgatggccgcattcagccggcccgttgggagagcatgaccgacgag
gcggtgatcgccgagctcgtcgatgtgcgtgggatcggccgctggaccgcggagatgttc
ctgatcttcaacctgctgcggcccgacgtctggccggtcgacgacatcggcctgcagaag
gcggtcgcgctgcattacctcgacaatgaacgccccacgccccggaccctgcggcgccac
ggcgagcggcatgcgccgtggcgcacggttgccacgtggtacttgtggcgcagcctggat
ccgaccgtggtgctgtattga
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