KEGG   Thioalkalivibrio paradoxus: THITH_11880
Entry
THITH_11880       CDS       T03590                                 
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
tti  Thioalkalivibrio paradoxus
Pathway
tti00061  Fatty acid biosynthesis
tti00071  Fatty acid degradation
tti01100  Metabolic pathways
tti01212  Fatty acid metabolism
tti02024  Quorum sensing
tti04146  Peroxisome
Module
tti_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:tti00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    THITH_11880
   00071 Fatty acid degradation
    THITH_11880
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    THITH_11880
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    THITH_11880
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:tti01004]
    THITH_11880
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tti04147]
    THITH_11880
Enzymes [BR:tti01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     THITH_11880
Lipid biosynthesis proteins [BR:tti01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   THITH_11880
Exosome [BR:tti04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   THITH_11880
  Exosomal proteins of breast cancer cells
   THITH_11880
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 Lipoprotein_22
Other DBs
NCBI-ProteinID: AHE98831
UniProt: W0DK56
LinkDB
Position
2569538..2571352
AA seq 604 aa
MTTTVITPERAGSLAGLFRERVDASPEKVAYRQFDPARGTWARCTWADMAHEVGRWQMAL
RREGLEPGDRVAMMLRNCREWITFDQAALGLGLVTVPLYTDDRPDNVAYILEQAGVKVLL
LEDRAQWRRLHPVRDRLPTVTTIVSLRGFDDDSAPGDPRLTAAADWLFGLDGDLITRLEE
PDHLATIVYTSGTTGRPKGVMLSHRALLFNAHAASQCAPLGGEDVFLSFLPLSHTLERTA
GYFLPMAVGAEVAFARSIAQLAEDLRVVQPTVLVSVPRIYESVYAKIQAGLKQKPAFARR
LFQATVNTGWARFEYLQRRAGWSPRLLLWPLLRRLVARQVLERLGGRLEYAVCGGAPLPP
PIARFFIGLGLPVYHGYGLTEASPVVTVNRPDDNLPASIGKPLPGVEIRIGEQDELLTRS
PSVMLGYWRNDEATAAAIDSDGWLHTGDKARVDDRGFVFITGRIKDIIVLGNGEKVPPAD
MEMAIQLDPLFDQVLVIGEARPFLSALVVLDDSAWREFAAELDIDPDSDDDLRGRFAERS
LLARVQAQLKDFPGYARIRRLTALREPWTIDDGLLTPTLKMKRARILDRHRDHVDRMYAD
YTDA
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgaccacgaccgtgatcacgccggaacgcgcgggcagcctggcgggcctgttccgcgaa
cgcgtcgacgccagtccggagaaggtggcctaccggcagttcgatccggcccggggcacc
tgggcacgctgcacctgggccgacatggcgcacgaggtcggacgctggcagatggcccta
cgccgcgaaggactggaacccggcgaccgggtggcgatgatgctgcgcaactgccgggag
tggatcaccttcgaccaggctgcgctgggactgggactggtcacggttccgctgtacacc
gacgatcgcccggacaacgtcgcctatatccttgagcaggcaggcgtgaaagtcctgctg
ctggaggaccgggcgcagtggcgacggttgcatcccgtgcgggaccggttgccgaccgtg
acgacgatcgtctcgctgcgcggtttcgacgacgacagtgcccccggagatccccgcctg
accgcggccgccgactggctgttcggactcgacggcgacctgatcacccgcctggaggaa
cccgaccacctcgcgacgatcgtctatacctcgggaaccaccgggcgcccgaaaggcgtg
atgctgtcgcaccgcgcgctgctgttcaacgcgcatgcggcctcccaatgcgcacctctc
ggtggcgaagacgtgttcctgtcgttcctgccgctgtcgcacacgctggagcgcaccgcg
ggatatttcctgccgatggcggttggcgcggaggtcgcgttcgcgcgctcgatcgcgcag
ctcgccgaagaccttcgggtcgtgcagccgacagtgctggtttcggtgccgcgcatctac
gagagtgtctatgcgaagatccaggcgggtctgaagcagaagccggcattcgcgcggcgg
ctgttccaggccacggtgaacaccggctgggcgcggttcgaatacctgcaaagacgcgcc
ggctggtcgccccgcctgctgctgtggccgctgctccggcgcctggtcgcgcggcaggtg
ctggaacgtctgggcgggcgtctggaatacgccgtctgcggcggtgccccgctgccgcca
ccgatcgcccgattcttcatcgggctgggccttccggtgtatcacggctacgggctgacc
gaggccagcccggtggtcacggtgaaccgccccgatgacaacctgcccgcgtcgatcggc
aagccgctgcccggtgtcgagatccgaatcggcgagcaggacgagctgctcacccgcagc
cccagcgtgatgctcggctactggcggaacgacgaggccaccgcggccgcgatcgactcc
gatggctggctgcacaccggcgacaaggcgcgggtcgacgatcgcggcttcgtgttcatt
accgggcgcatcaaggacatcatcgtgctgggcaacggtgaaaaggtgccgcccgcggac
atggaaatggcgatccagctcgacccgctgttcgaccaggtgctggtgatcggcgaggcg
cggccgttcctgtcggcgctggtggtgctcgacgactcggcctggcgcgaattcgcagcc
gaactcgatatcgacccggacagtgacgacgacctgcgcggccgcttcgccgaacgcagc
ctgctggcgcgcgtgcaggcacagctcaaggattttcccggctatgcgcggatccggcgg
ctgaccgcgttgcgcgagccctggaccatcgacgacggcctgctgacccccacactgaag
atgaagcgcgcacgcatcctggaccgacaccgcgaccatgtcgaccggatgtatgccgac
tacaccgacgcctga

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