Thioalkalivibrio paradoxus: THITH_12100
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Entry
THITH_12100 CDS
T03590
Name
(GenBank) 23S rRNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
tti
Thioalkalivibrio paradoxus
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tti03009
]
THITH_12100
Enzymes [BR:
tti01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
THITH_12100
Ribosome biogenesis [BR:
tti03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
THITH_12100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_11
RrnaAD
Cons_hypoth95
MTS
TRAM
Methyltr_RsmB-F
Methyltransf_12
Methyltransf_ANTKMT
Methyltransf_23
PCMT
Ubie_methyltran
TRM5-TYW2_MTfase
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
AHE98873
UniProt:
W0DPE6
LinkDB
All DBs
Position
complement(2609111..2610394)
Genome browser
AA seq
427 aa
AA seq
DB search
MEDLTLEGQGVGRRAGKACFVDGALPGERVRAVQTGCKRNFDTARLDAVLEPAAERVEPH
CAWFGVCGGCRLMHADIALQRRLKERSLFETLARIGHVQPERRLEPLTGADLGYRRTARL
GVKYVAKKGGTLVGFRERGGRYLADMRDCPVLHPALGGRIAKLREFIDGLDARERIPQIE
AAVDDAGTTALVFRHLQPLSVPDLDRLAAFAEAEGVQLYLQPGGPDSVQFHAGPAAELHY
AHPEFGLQVEFQPLDFIQVHAGINRDMVLRALDLLALTPESRVLDLYCGLGNFTLPLAQR
AREVLGVEGDAVMLDRARANAEAQGIGNTRYRRANLEDPALADAAWLQEPFDRVLLDPPR
TGAAAVVAALGPRAIPRLVYVSCNPATLARDAGELVQRFGYRLEAAGIMDMFPHTAHVES
MALFTRG
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atcgaggatctgaccctggaagggcagggggtcggccggcgtgctggcaaggcctgtttc
gtcgacggtgcattgcccggcgagcgcgtgcgcgcggtgcagaccgggtgcaagcgcaac
ttcgacaccgcgcgtctggatgcggtcctcgagcccgccgccgagcgcgtcgagccgcac
tgcgcctggttcggcgtctgcggcggctgccgattgatgcacgccgacatcgcgctgcag
cggcggctgaaggagcgcagtctgttcgagacgctggcgcggatcggccacgtgcagccc
gaacgccggctggaaccgctgaccggcgccgatctgggctaccggcgcacggcccggctc
ggggtgaaatacgtcgcgaagaaagggggaaccctggtcggcttccgcgaacgcggcggg
cggtacctggccgacatgcgcgactgcccggtgctgcacccggcgctcggcgggcggatc
gcgaaactgcgggaattcatcgacgggctcgatgcccgcgagcggattccccagatcgag
gcggcggtcgatgatgccggcaccaccgcgctggtgttccgccatctgcagccactgtcg
gtgccggatctggaccggctggccgcgttcgcggaggccgagggcgtgcaactgtacctg
cagcccggcggacccgattccgtgcagtttcacgccggacccgcggcagaactgcactat
gcccacccggagttcgggctgcaggtggaattccagccactcgatttcatccaggtgcac
gccgggatcaatcgggacatggtgctccgggccctcgacctgctcgcgcttacgccggag
tcgcgggtgctcgatctgtattgcgggctgggcaacttcacgctgccgctggcgcaacgg
gcgcgcgaagtgctcggggtcgagggtgatgccgtgatgctcgaccgagcgcgtgccaac
gccgaggcgcaggggatcggcaacacccggtatcggcgcgccaacctggaggatccggcg
ctggccgatgcagcctggctgcaggagccattcgaccgggtgctgctggatccgccgcgt
accggcgctgcggcggtcgtcgctgcgctggggccgcgtgccatcccgcggctggtctat
gtgtcctgcaacccggcgacgttggcgcgcgacgcgggcgaactggtgcagcgtttcggc
tatcgcctcgaggccgcggggatcatggacatgtttccgcacaccgcgcatgtcgagtcg
atggcgctgttcacccgcggctga
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