Thioalkalivibrio paradoxus: THITH_12230
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Entry
THITH_12230 CDS
T03590
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tti
Thioalkalivibrio paradoxus
Pathway
tti03030
DNA replication
tti03430
Mismatch repair
tti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THITH_12230
03430 Mismatch repair
THITH_12230
03440 Homologous recombination
THITH_12230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tti03032
]
THITH_12230
03400 DNA repair and recombination proteins [BR:
tti03400
]
THITH_12230
Enzymes [BR:
tti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THITH_12230
DNA replication proteins [BR:
tti03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
THITH_12230
DNA repair and recombination proteins [BR:
tti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
THITH_12230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_22
RuvB_N
AAA_16
AAA_30
AAA_5
AAA_18
AAA_19
Mg_chelatase
AAA_14
TsaE
AAA_2
nSTAND3
AAA_28
SKI
zf-CXXC
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AHE98897
UniProt:
W0DNR9
LinkDB
All DBs
Position
complement(2629755..2631605)
Genome browser
AA seq
616 aa
AA seq
DB search
MSHQVLARKWRPSRFEDLVGQPHVVRALVNALSSGRLHHAYLFSGTRGVGKTTVARILAR
CLNCETGVTATPCGHCRSCVEIAEGRHLDLIEVDAASRTRVDDTRELLDNVSYAPVSGRY
KVYLVDEVHMLSEKSFNALLKTLEEPPPHIVFLLATTDPQKLPVTVLSRCLQFNLKPMPA
ALIAEHLERILASEGVAAAPGALLRLAEAAEGSMRDALSLTDQAIAYSGDELGESEICDM
IGLLPRSRLTELLDVVWARQGRRMFEVLGELDALAPDWARLLEELAALVHGVAVQQVLSQ
EPGAAGAGVPDDPASRWAQQAAEREAPEDIQLAYQILLQGARDLPYAPDARIGVEMTLLR
MLAFRPAPDARAADPAAPAGTRGAGPVAAASSVAPEPAPARTATSGATPARSPAPGTPAA
GASVASPPAPRSASGVREPGAREAASVPAMNARHPAAVDQDQPAPSPRQSSQAAGSGSTS
ALDWHAFASTLPAGPARELALHADLLECGPERVVIAVQPAHRMLGTARTRARLAEALGRA
LGYEVGLDLREQAAPSDNTPAARLAADAADRHARAEAELRADPVIQTLQQTFGAEVTRVV
VGDDDSRPEADTPPAS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatcaggtgctggcccgaaaatggcgccccagccggttcgaggacctggtgggc
cagccgcatgtagtgcgcgcgctggtgaatgcgctgagcagcggccgcctccatcacgcc
tatctgttttcggggacccgcggggttggcaagacgacggtcgcccgcatcctggcccgc
tgcctcaattgcgaaacgggtgtgaccgcgacgccctgcggccattgccggtcctgcgtc
gaaattgccgaagggcggcatctggacctgatcgaggtcgacgcggcatcgcgcacccgg
gtcgacgacacccgggagctgctggacaacgtttcctacgcaccggtttcggggcgctac
aaggtgtacctggtcgacgaggtgcacatgctctccgagaagagcttcaatgcgctgctg
aagaccctcgaggagccgccaccgcacatcgtcttcctgctggcgaccaccgatcctcag
aagttgccggtgaccgtgctctcgcgctgtctccagttcaacctgaagccgatgccggcg
gcgctgattgccgagcacctggagcgcatcctcgcgtcggagggcgtggccgcagcgccg
ggcgcgttgctgcggctggcggaagccgccgaggggagcatgcgcgacgcgctcagtctt
accgaccaggcgatcgcctattccggcgacgagctgggcgagtccgagatctgcgacatg
atcggcctgttgccgagatcgcggctgaccgaactcctcgacgtggtctgggcgaggcag
gggcggcgcatgttcgaggtgctgggcgaacttgatgcgctggccccggactgggcccgg
ctgctcgaggagctggcggcattggtgcacggcgtggcggtgcagcaggtgctgtcgcag
gagccgggggcggctggagccggcgtgccggacgaccccgcgtcgcgctgggcgcagcag
gccgcggagcgcgaagcgcccgaggatatccagcttgcctaccagatcctgctccagggg
gcgcgtgatctgccgtatgcgccggacgccaggatcggggtcgaaatgacgctgttgcgc
atgctggcgttccggcccgcgccagacgcgcgggcagccgaccctgcggcgcccgccggc
acgcgcggcgccgggcccgttgcggccgcgtccagcgtggcgccagagccggcgccggcc
cgcaccgcgaccagcggcgcgacgcccgcgcgatcgcccgcgccggggacccccgcggca
ggggcgtctgtggcaagcccgcctgcgccccgatccgcaagcggagtccgcgagccgggt
gcccgtgaggccgccagcgtgccggccatgaacgcccggcatcccgctgcggtcgaccag
gaccagcccgcccccagtccgcggcagtcctcgcaagcggccggttccggcagcaccagc
gcgctggactggcatgccttcgcgagtacgcttcccgccggtccggcacgtgaactggcc
ctgcacgcggacctgctcgaatgcggacccgagcgggtggtcattgcggttcagcctgcg
catcgcatgctgggtaccgcgcgaacccgcgctcggttggctgaggcattgggccgcgcg
ctcggatacgaggtcggcctggaccttcgggagcaggcggcaccgtctgacaacactccg
gccgccaggcttgcggcggacgcggccgaccgtcacgctagggccgaggcggaactccgt
gccgacccggtgatccagacgctgcagcagaccttcggcgcagaggttacccgggtcgtc
gtcggcgacgatgacagccgccctgaagcggacaccccgccggcgtcctag
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