Thioalkalivibrio paradoxus: THITH_12245
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Entry
THITH_12245 CDS
T03590
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tti
Thioalkalivibrio paradoxus
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tti03016
]
THITH_12245
Enzymes [BR:
tti01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
THITH_12245
Transfer RNA biogenesis [BR:
tti03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THITH_12245
Prokaryotic type
THITH_12245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
GP38
Motif
Other DBs
NCBI-ProteinID:
AHE98900
UniProt:
W0DPV5
LinkDB
All DBs
Position
complement(2634935..2635984)
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AA seq
349 aa
AA seq
DB search
MSGGESDGPVYPWGLPLQARIKTCPEDFVVDEIPATQPSGEGTHVWLQIRKRGRNTEDVA
EWLARAAGAARVAVGYAGRKDRHAITTQWFSVDLAGRQEPDWNGAVPDGVEILDRRRHAR
KLKTGHLRGNRFWLRLRDVRGDRQAADALLGRIRDRGLPAYFGEQRFGHANLERARAWFA
GRMRPRSRNQRGLYLSAARAAIFNEVLRRRVREGTWDRLLSGELANLDGRGSVFPVPEID
VDLEARCAQLEIHPTGPLWGRGGSGSAGEALVLEREVAGALGELAAGLEREGVDPARRPL
RLRPRTLAWVWQAPDMLQLEIELGPGEYATGVAEAIARLSETGHLGPAR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggggcgagtcagacggacccgtgtatccgtgggggctgccgctgcaggcgcgt
atcaagacctgcccggaggatttcgtggtcgacgagatcccggcgacgcagccctcgggc
gagggcacgcatgtctggctgcagatacgcaagcggggccggaacaccgaggacgtggcc
gagtggctggcacgggccgccggtgccgcgcgcgtcgcggtcgggtatgccgggcgcaag
gatcgccatgccatcaccacccagtggttcagcgtcgacctggccgggcgacaggagccg
gactggaacggcgcggttccggatggagtggagatcctcgatcgccggcgccatgcgcgc
aagctgaagacgggccatctgcgaggcaatcgcttctggctgcggctgcgcgacgtccgg
ggcgacaggcaggccgcggacgcgctgctcgggcgaatccgcgatcgcgggctgccggcc
tatttcggcgagcagcgcttcgggcatgccaatctggaacgcgcgcgggcctggttcgcc
gggcggatgcgcccgcgcagccgcaaccagcgcgggctctacctgtcggcggcgcgagcg
gcgatcttcaacgaggtgctgcgccggcgggtccgcgagggaacctgggaccggctgctt
tccggggagctggcaaacctcgacgggcggggcagcgtgttcccggtgccggagatcgac
gtggatctggaggcacgctgcgcgcagctcgagatccacccgacggggcctctttggggc
cggggcgggtcgggcagcgctggcgaggcgctggtgctggaacgcgaggtggccggcgca
ctcggggaactcgccgccggcctcgaacgcgagggtgtcgatccggcccgccggccgttg
cggctgcggccccgtacgctggcgtgggtctggcaggcgcccgacatgctgcagctggaa
atcgagctgggtcccggcgaatacgccaccggcgtcgcggaagcgattgcgcgactcagc
gaaaccggccacctcgggccggcgcgctga
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