Thioalkalivibrio paradoxus: THITH_12305
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Entry
THITH_12305 CDS
T03590
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
tti
Thioalkalivibrio paradoxus
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tti03000
]
THITH_12305
Transcription factors [BR:
tti03000
]
Prokaryotic type
Helix-turn-helix
LysR family
THITH_12305
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_5
GerE
Motif
Other DBs
NCBI-ProteinID:
AHE98911
UniProt:
W0DKC8
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Position
complement(2647292..2648335)
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AA seq
347 aa
AA seq
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MPPPTDPHLIPPSAMPVYLIRHATLRQLQVFEAIVRLGSFTRAAEELFLTQPTVSMHIRK
MSEAMGLPLFEHVGRNVKPTEAGVELYDACRRMFETLANLEMKMADLKGMRRGRLRLGVI
TTAKYFASEILGEFCRLYPGIEVALKVTNRDRIVEGMLANEDDLYIMGQAPCEEIEVEEF
PVAPNPLVVMAPRDHPLVGQKRIPFARIAEEPFLLREPGSGIRDATLKAFDAHGLRPKVR
MELGSNEAIKHAVVGGLGLSVLSLHSLTLEGTNGPVAVLDVEGFPTMRQWYLVYPKGKEL
SLVARTFLEFAIASEPRIRTRMESLWPGLQLLLDSGERLPARKSAGS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctccgaccgatcctcacctcattcccccgagcgctatgccggtgtacctgatc
cggcatgccacgctgcgccagctccaggtcttcgaagccattgttcgcctcgggagtttc
acgcgcgcggcggaggagctgttcctgacccagccgacggtgtcgatgcacattcgcaag
atgtccgaggcgatgggcctgccgctgttcgaacacgtggggcggaacgtgaagcccacc
gaggccggcgtcgagctctacgatgcctgtcgcaggatgttcgagacgctcgcgaacctc
gaaatgaagatggccgacttgaaggggatgcgccgggggcggctgcggctgggggtgatc
acgaccgccaagtactttgcctccgagatcctcggcgaattctgtcgtctgtacccgggt
atcgaggtggcgctgaaggtcacgaaccgggatcggatcgtcgaagggatgctggcgaac
gaggacgatctctacatcatggggcaggcgccctgcgaagagatcgaggtcgaggaattt
ccggtcgcgcccaacccactggtggtgatggcgccccgcgatcatccgttggtggggcag
aagcgaatcccgttcgcgcgcattgccgaggagccgttcctgctgcgcgagccaggatcg
gggatccgtgacgcgacgctgaaggccttcgatgcccatggtctgcgccccaaggtgagg
atggaactcggcagcaacgaggcgatcaagcacgcggtcgtcggcggtctcgggctttcg
gtgctgtcgctgcacagcctgacgctggagggcaccaacgggccggtggcggtgctcgac
gtcgagggtttccccacgatgcggcaatggtatctggtctatccgaagggcaaggagctt
tcgctggtggcgcgcaccttcctggaattcgcgattgccagcgagccccggatccgcacc
cgtatggaatcgttgtggccagggctgcagctgttgctcgattcgggcgagcggctgccc
gcacgcaagagcgcaggctcctga
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