Thioalkalivibrio paradoxus: THITH_12630
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Entry
THITH_12630 CDS
T03590
Name
(GenBank) lytic transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
tti
Thioalkalivibrio paradoxus
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tti01011
]
THITH_12630
Enzymes [BR:
tti01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
THITH_12630
Peptidoglycan biosynthesis and degradation proteins [BR:
tti01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
THITH_12630
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Gene cluster
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
PG_binding_3
PG_binding_2
Glucosaminidase
Motif
Other DBs
NCBI-ProteinID:
AHE98962
UniProt:
W0DNX3
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Position
2724665..2725855
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AA seq
396 aa
AA seq
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MIKVLPALTLSAALAPLALGATTEFEACLGEIREQAVDQGIDPGTTDQVLDRVERLERVI
ELDRRQPEFTTPFSDYLNRRVTTQRIVQGRALLHAHRALLDRVHAETGVPPAYLLALWAL
ETNYGNHFGSFFVPSALATLACDPRRASYFTGELIAALRIVEEEAIPLERMQGSWAGAMG
HVQFMPSVFLQYAVDGDGDGRRDLWGSVPDAMMSAGNFLAGLGWDDAYRWGREVLLPQDF
DYGQAGRSQRRALGEWRRQGVTDTSGQPVADLDIDAALLLPAGHRGPAFLVYDNFDVIMG
WNRSEFFALTVGHLADRIAGGGRLHNPPPADAPRMSREQVIELQTALNAMGYDSGEVDGI
LGPATRNAIRAYQQAEGMIPDGFPDPILLARLDIDV
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagttctgcctgctctgacgctgtcagcggctctggccccgctcgcgctcggc
gcgacgaccgaattcgaggcctgcctcggcgaaatccgggaacaggcggtcgaccagggc
atcgaccccggaaccacggatcaagtgctggaccgggtcgaacgtctcgagcgggtcatc
gaactcgaccggcgtcaacccgagttcacgaccccgttcagcgactacctgaaccggcga
gtcaccacccagcgcatcgtgcagggccgcgcactgctgcacgcgcaccgcgcgctgctc
gaccgcgtccatgcggaaaccggcgtgccgcccgcctacctcctggccttgtgggcactg
gagaccaactacggaaaccacttcggcagcttcttcgtacccagcgcgctggcgacgctg
gcctgcgacccccgccgggcgagctatttcaccggtgaactgatcgccgccctgcggatc
gtcgaggaggaggcgattccgctggagcgcatgcagggctcctgggccggcgcgatgggc
cacgtgcagttcatgccctcggtattcctgcagtatgcggtggatggcgacggtgacggc
cggcgcgatctctggggcagcgtcccggacgcgatgatgtccgccggcaacttcctggcc
gggctcggctgggacgacgcctatcgctggggccgcgaggtgctgctgccgcaggatttc
gactacggtcaggcaggtcgcagccagcgccgcgcactcggcgaatggcgccgccaggga
gtgaccgacacctcggggcaaccggtggccgatctggacatcgacgctgccctgctgctg
cctgccgggcaccgcgggccggcgtttctggtgtacgacaacttcgacgtgatcatgggc
tggaaccgctccgaattctttgccctgacggtgggccacctggccgatcggatcgcaggc
ggcggcaggctgcacaacccgccacccgccgacgcgccgagaatgtcgcgcgagcaggtg
atcgagctccagactgcactcaacgcaatgggctacgatagcggcgaggtagacggcatc
ctcggaccggccacgcgcaatgcgatccgcgcataccagcaggcggaaggcatgattcca
gacggtttccccgaccccatcctgctggcgcgcctggacatcgacgtctga
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