Thioalkalivibrio paradoxus: THITH_12895
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Entry
THITH_12895 CDS
T03590
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tti
Thioalkalivibrio paradoxus
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tti03016
]
THITH_12895
Enzymes [BR:
tti01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
THITH_12895
Transfer RNA biogenesis [BR:
tti03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THITH_12895
Prokaryotic type
THITH_12895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AHE99003
UniProt:
W0DPS4
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All DBs
Position
complement(2788080..2789006)
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AA seq
308 aa
AA seq
DB search
MPIQRRDIDGIILLDKPRGLSSNQALGRVKYLLAARKAGHTGSLDPLATGLLPLCFGQAT
KVSAWLLDADKRYRAVARLGVETSTGDMEGEIQNERPVPVLTAAEIDAACAGFRGEIQQV
PPMHSALKHQGQRLYALARKGIEVERPARNVTIHELRAVFEAPDRLRVEVHCSKGTYIRT
LIEDLGRVLGCGAAVAELRRTGHGAFDARGMVTLEELEAASAEGGPQALERWLLPADSAL
SGCPEVRLDAASTRFLRQGQPVFVAQIRDRGPLRLYGSNGEFLGVGALLDDGRVAPRRLF
VAGGPAGA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgccgatccagcgccgtgacatcgatggcatcatcctgctcgacaagccgcggggcctg
agttcgaatcaggcgctggggcgggtcaaatacctgcttgcggcccgcaaggcggggcat
accggcagcctggatccgctggccaccggcctgcttccgctttgtttcgggcaggcgacc
aaggtctccgcttggcttctggatgcggacaagcggtatcgcgcggtggcccgtctcggg
gtcgagacctcgaccggggacatggaaggtgagatccagaacgagcgtccggtgccggtg
ctgaccgccgccgagatcgatgcggcctgtgccggtttccgcggcgaaatccagcaggtg
ccgccgatgcactcggcactgaagcaccaggggcagcggttgtatgcgctggcgcgcaag
ggcatcgaagtggaacggcctgcgcggaatgtgaccatccatgagctgcgcgcggtgttc
gaggcgccggaccggctgcgcgtcgaggtgcattgcagcaagggaacctatatccgcacc
ctgatcgaggatctcggccgtgtgctgggctgcggggccgcggttgcggaactgcgcaga
acgggtcatggagccttcgatgccaggggaatggtcaccctggaagaactggaggccgcg
tccgccgaggggggtccccaggcgctggagcgctggctgctacccgcggacagcgcgctg
tcgggctgcccggaagtgcggctggatgccgcgagcacgcgtttcctgcgtcaggggcag
ccggtgttcgtcgcccagatacgggaccgcgggcccctgcggctgtacggatcgaacggc
gagtttctcggggttggcgcattgctcgatgacggccgggtggcgccgcggcggctgttc
gtggccggcggcccggcaggcgcctga
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