Thioalkalivibrio paradoxus: THITH_13740
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Entry
THITH_13740 CDS
T03590
Name
(GenBank) helicase
Organism
tti
Thioalkalivibrio paradoxus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
AHE99146
UniProt:
W0DL12
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All DBs
Position
2970118..2974230
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AA seq
1370 aa
AA seq
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MENSLFGNDTDAPGLRELERIILQAAAVHYSPVGRMRLADTLRTLGVRTPGGRAAHYPEI
KPLILQLLQEGKLEGTGKGLQCPRDQVEALLDQAMEHDRLPALAAAVRSSASVSYDWYGQ
PIYRQYDELIRDLRIALILGNDDLVQELLTQALASHMESTVRHPLLQVDSRGHRAPWLQR
LSPARHQTILLTLTASALIRMEPIDTLQEDLAQTRWINDEWALHARQRRAEFALLAGDTD
TALALLGDNEYPSTLTLRAWADLVRGDIDAAREGYARALATLRKGSRKRNLYFHDLAGTF
SLIPLLAANDLETAADLATRAIKDRDNTLVDVYQIWPPLIAVRRGQKAAPADDILVSTQP
GPLHLLPLLVLFWMDPEKLTPYLPEAESLAHRAQAAGMHWLAAQIQALLNRQRGDAPDPL
TEGVALVDLVTRIEPWEATLDALTALGGAPKDADSQTTRDERVVWWLRPYQGQLLIQPKL
QRRTRRDGWTLGRNIALSALHTDQLDALDDDDRRVCAAIVEQYPAWGYGGSRLEFDPTRA
ALALIGHPRLFRSDEPSTAVELVAAVPALRVRRSKGRLRMALQPPLPKGGTLRIVEETRN
RWQVVRFDDTHRQIGELLDGGLNIPVEAEERVREAIARIAPRIDIHSDIGGDEDLPRVDG
DTTPYLALIPSGDGLTAELRVRPLGSGGSGFTPGHGGAELTAAGSDGTRRRVRRNLTQER
KQARAVVEACPALEGWEIDPFVWGLPEPQDCLELLEQLQALDEQVTVEWPRGQNLNLSAR
ADGSGFSLSLNHRGDWFEASGELQVNEHLVLDLQRLLALLDTGGGSRFLPLGDGRFLALT
ENFRKRLQDLRDIADSGARKPRYHPLNAPVLEEIATDFGQFQADAAWHERLQRLRNADAS
PAAIPATLEAELRDYQVDGYRWLMRLAAWGVGACLADDMGLGKTVQVLAALVARAPLGPS
VVIAPTSVCGNWLSEARRFAPTLNPIVFGNGDRQAQIQALGAFDLLIVSYGLMQQEIELL
SAREDWNCLVLDEAQAIKNPATQRARAAFGLPAAFRIATTGTPVENHLGELWSLFRFLNP
GLLGSREAFNQRYALPIERDQNHEARDRLRRLVRPFILRRLKSAVLEELPPRTEIQLQVD
PSPRETAFYEAFRRQILEGLGTEITPAQQDRFEVLAAITRLRRAACHPELVSPGIGIPCG
KLALFLEVVEELRDGRHRALVFSQFVDHLNLVRAALDQRGIPYQYLDGSTPASARAERVA
AFQGGAGDLFLISLKAGGTGLNLTAADYVIHLDPWWNPAVEDQASDRAHRIGQQRPVTVY
RLVMRGSIEERIIDLHARKRDLADTLLEGGDASARLDTEALLALLREERG
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
ttggagaactcgcttttcggcaacgacaccgacgccccgggcctgcgcgaactcgaacgg
atcatcctccaggcggcggccgtgcactactcgccggtcggccgcatgcggctggccgat
accctgcgcacgctgggcgtccgcaccccaggcggccgggcggcccattacccggagatc
aagccgctgatcctgcagctgctgcaggaaggcaaactggagggcaccggcaagggcctg
caatgcccccgcgaccaggtcgaggcgctgctggaccaggccatggaacacgaccggcta
ccggcgctggccgccgcggtaagatccagcgcgagcgtgtcttacgactggtacggccag
cccatctaccggcagtacgacgaactgatccgggatctgcgcatcgcgttgatcctgggc
aacgacgacctcgttcaggagttgctgacccaggcactcgccagccatatggagtcgacc
gtccgccaccccctgctgcaggtggacagccggggccatcgtgcgccctggctccagcgg
ctgtcgcccgcgcggcaccaaaccatactgctgacgctgaccgcgagtgccctgatccgg
atggagccgatcgacacgctgcaggaagacctggcccagacccgctggatcaacgacgaa
tgggccctgcacgcgcggcagcgacgggccgagtttgcattgctggccggtgacaccgac
acggcgctggccctcctaggcgacaacgaatacccgtcgacgctgacactgcgggcctgg
gcggatctggtgcgcggggacatcgacgcggcacgggaaggatatgcgcgggcgctggcg
acgctgcgcaagggctcgcgcaagcgcaacctgtacttccacgacctggccggtaccttc
tcgctgatcccgctgctggccgcgaacgacctggagacggctgccgacctggccacccgg
gccatcaaggaccgggacaatacgctcgtcgacgtgtatcagatctggccgccgctgatt
gccgtacggcgcgggcagaaggccgcgcctgccgacgacatcctcgtctcgacgcagcct
gggcccctccatctactgccgctgctggtattgttctggatggacccggaaaagctgacc
ccgtacctccccgaggccgagagtctggcgcaccgggcacaggccgccgggatgcactgg
ctcgccgcacagatccaggcgctgctgaaccgccagcgcggagacgcgccggaccccctg
accgaaggcgtggcactggtggatctcgtcacgcggatcgagccctgggaagccacgctc
gatgccctgacggcgctgggcggcgccccgaaggatgccgactcgcagacgacccgcgac
gagcgcgtcgtctggtggctccggccctaccagggccagctcctgatccagcccaagctg
cagcggcgcacacggcgcgacggctggacgctgggccgcaatatcgcgttgtcggcgttg
cacacggaccagctggacgcgctggacgacgacgaccggcgcgtctgcgccgccatcgtc
gagcagtatcccgcctggggctacggcggatcccggctggaattcgacccgacccgtgcc
gcgctggcgctgatcggccatccgcggctgtttcgctcggacgaaccgtccacggcagtg
gaactggtcgcggccgtcccggcgctgcgcgtgcggcgcagcaagggccggctgcgcatg
gcgctgcagccgccgctgccgaaaggcggcacgctgcggatcgtggaagaaacgcgcaac
cgctggcaggtcgtgcgcttcgacgacacgcatcggcagatcggcgaactgctcgacggc
ggcctgaacataccggtggaggccgaagaacgggtacgcgaggcgatcgcgcgcatcgcg
ccgcgcatcgacattcactccgatatcggcggcgacgaggatctgccgcgcgtggacggc
gacaccacgccctacctcgcgctgatccccagtggcgacggactgaccgcggagctccgg
gtacgccccctgggttcaggcggcagcggcttcacccccggccacggcggcgcggaactc
accgcggcagggagcgacggcacgcgccgccgggtgcgccgcaacctgacccaggaacgg
aagcaggcccgcgccgtggtcgaggcctgcccggcgctcgaaggctgggagatcgatccc
ttcgtctggggcctgccggaaccgcaggactgtctcgaactgctggaacagctgcaggcg
cttgacgagcaggtgaccgtggaatggccgcgcggccagaacctgaacctcagcgcccgg
gccgacggttccgggttcagcctgtcgctgaaccaccgcggcgactggttcgaggccagc
ggcgaactgcaggtcaacgagcacctcgtgctcgacctgcagcgcctgctggccctgctc
gacaccggcggcggcagccgcttcctgccgctgggcgacggccgtttcctggcgctgacc
gagaacttccgcaagcgcctgcaggatctgcgcgacatcgccgacagcggcgcccgcaag
ccgcgctaccacccgctcaacgcgccggtgctggaagagatcgcaacagacttcggccag
ttccaggccgacgccgcctggcacgaacgcctgcagcgcctgcgcaacgccgacgcaagc
ccggccgccattcccgcgaccctagaggcggaactgcgcgactaccaggtcgacggctac
cgctggctgatgcggctggccgcctggggcgtgggcgcctgcctcgccgacgacatgggc
ctgggcaagaccgttcaggtactggccgcgctggtcgcccgcgcgccgctggggcccagc
gtggtgatcgcgccgacctcggtctgcggcaactggctgagcgaagcccggcgcttcgcg
ccgacgctgaacccgatcgtgttcggcaacggcgaccggcaggcgcagatccaggcactg
ggcgcgttcgacctgctgatcgtgagctacggcctgatgcagcaggaaatcgagttgctg
agcgcgcgcgaggactggaactgcctggtgctggacgaagcccaggcgatcaagaacccg
gcgacccagcgcgcccgcgccgcattcggactgccggccgcgttccggatcgcgaccacc
ggcaccccggtggagaaccatctgggggaactctggagcctgttccggttcctgaacccg
gggctgctcggctcgcgtgaggccttcaaccagcgctacgcgctgccgatcgaacgcgac
cagaaccacgaagcgcgcgaccggctgcgccggctggtccgcccgttcatcctgcgccgg
ctgaaaagcgcggtgctggaagaattgccgccgcgcaccgagatccagctacaggtggac
cccagccctcgggaaaccgcattctacgaagccttccgccgccagatcctcgaaggactc
ggcaccgagatcaccccggcacagcaggaccgtttcgaagtgctcgccgcgatcacccgg
ctgcgccgcgccgcctgccacccggaactggtcagccccggcatcggcattccctgcggc
aagctggcgctgttcctggaagtggtcgaggaactgcgcgacggccgccaccgtgcgctg
gtgttcagccagttcgtcgatcacctgaacctggtgcgcgcggcgctggaccaacgcggc
atcccctaccaatacctggatggctccacccccgccagcgcccgggccgagcgcgtcgcg
gcattccagggtggcgccggcgacctgttcctgatcagcctgaaggccggcggcaccggc
ctgaacctgaccgccgccgactacgtgatccacctcgacccctggtggaaccccgcggtc
gaagaccaggcctccgaccgcgcccaccgcatcggccagcaacgcccggtgaccgtctac
cgcctggtgatgcgcggcagcatcgaggaacgcatcatcgacctgcacgcccgcaagcgc
gacctcgccgacaccctgctcgaaggcggcgacgccagcgcccgcctcgacaccgaagcg
ctgctagcgctgctgcgcgaggaacggggctga
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