Thioalkalivibrio paradoxus: THITH_14475
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Entry
THITH_14475 CDS
T03590
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
tti
Thioalkalivibrio paradoxus
Pathway
tti00470
D-Amino acid metabolism
tti00550
Peptidoglycan biosynthesis
tti01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
THITH_14475 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
THITH_14475 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tti01011
]
THITH_14475 (murD)
Enzymes [BR:
tti01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
THITH_14475 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
tti01011
]
Precursor biosynthesis
Amino acid ligase
THITH_14475 (murD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Thi4
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AHE99277
UniProt:
W0DPW6
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All DBs
Position
complement(3132419..3133759)
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AA seq
446 aa
AA seq
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MTPTDLHSRQDILVVGLGATGLSVARYLAGQQLDFEVTDTRPAPPGLQQLQRVSGGRGRW
AGPLDSVDTVSRRRIVVSPGVPLARLELQRAAAAGVEIVGDVELFLRDARHPVVGITGSN
GKSTVAALTAELLRALGQPVAIGGNFGPPALDLLAQDVELYVLELSSFQLETVRSPGLAS
AAILNISADHLDRYSDMDAYVAAKSRILEGAAHAVLNRDDPALQGLAAGRETITFGLDRP
PGPADFGIVETDSGTWLARGASPLIATRELALQGRHNWLNALAALALVWPWVVHAEPLLP
ALRDFTGLPHRSQRVGRQAGVDYVDDSKGTNVGATLAAIQGVSGPLILIAGGQGKGQDFG
PLADALAGKARGVLLLGVDAPRIEQALRGVVPVRRVGTMQEAVAAAAQWAQPGDTVLLSP
ACASLDMFANYAERGECFAQAVRGLA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacccccaccgacctccattcgcggcaggacatcctggtcgtcgggctgggcgcaacc
ggcctgtccgttgcccgctacctggccggccagcagctggatttcgaggtcacggacacg
cgcccggccccgccggggctgcaacagctgcagcgggtctcgggcgggcgcggccgctgg
gccggtccgctggactcggtcgataccgtgtcgcggcgccgcatcgtcgtctcgccgggc
gtgccgctggcccggctcgaactgcagcgcgccgccgcggccggggtcgagatcgtcggc
gacgtcgaactcttcctgcgcgacgcgcgccatcccgtggtcgggatcaccggctccaac
ggcaagagcaccgtggccgcgctgaccgcggagctgctgcgggcactcgggcaacccgtg
gccatcggcggcaatttcggtcccccggcattggacctgctggcacaggacgtggagctc
tacgtgctggagctctcgagtttccagctggagacggtccgcagcccgggtctggcaagc
gccgcgatcctgaacatcagcgccgaccatctggaccggtattcggacatggacgcctat
gtcgccgcgaagtcccggatcctcgagggggcggcccacgccgtcctgaaccgcgacgat
ccggcactgcaggggcttgcagccggccgggaaacgatcactttcggtctcgaccggccg
ccggggcccgcggacttcggcatcgtcgagaccgactccggcacctggctggctcggggg
gcgagcccgctgatcgcgacccgcgagctggcgctgcaaggccggcacaactggctcaat
gccctggccgccctggcactggtctggccgtgggtcgtgcatgccgagccgctgcttccg
gcgctgcgcgatttcaccggcctgccgcaccgttcccagcgggtggggcggcaggcaggg
gtcgactatgtcgacgattcgaagggcacgaacgtgggcgcgacgctggccgccattcag
ggcgtatcgggtccgctgatcctgatcgccggcggacagggcaagggccaggacttcggg
ccgctggccgatgcgctggccggcaaggcacgcggtgtgctgctgctcggcgtcgatgcg
ccgcggatcgagcaggcgctgcgcggcgtggtgccggtgcgccgtgtcggcacgatgcag
gaggcggtggccgcggctgcacagtgggcgcagccgggggatacggtgctgctgtccccg
gcctgcgcaagcctcgacatgttcgcgaactacgccgagcgcggcgaatgcttcgcgcag
gcagtacgggggctggcgtga
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