Thioalkalivibrio paradoxus: THITH_15270
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Entry
THITH_15270 CDS
T03590
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tti
Thioalkalivibrio paradoxus
Pathway
tti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THITH_15270 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tti03019
]
THITH_15270 (groEL)
03110 Chaperones and folding catalysts [BR:
tti03110
]
THITH_15270 (groEL)
03029 Mitochondrial biogenesis [BR:
tti03029
]
THITH_15270 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tti04147
]
THITH_15270 (groEL)
Enzymes [BR:
tti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
THITH_15270 (groEL)
Messenger RNA biogenesis [BR:
tti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
THITH_15270 (groEL)
Chaperones and folding catalysts [BR:
tti03110
]
Heat shock proteins
HSP60 / Chaperonin
THITH_15270 (groEL)
Mitochondrial biogenesis [BR:
tti03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
THITH_15270 (groEL)
Exosome [BR:
tti04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
THITH_15270 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
THITH_15270 (groEL)
Exosomal proteins of breast cancer cells
THITH_15270 (groEL)
Exosomal proteins of colorectal cancer cells
THITH_15270 (groEL)
Exosomal proteins of bladder cancer cells
THITH_15270 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
REF
Motif
Other DBs
NCBI-ProteinID:
AHE99412
UniProt:
W0DQ85
LinkDB
All DBs
Position
complement(3288077..3289732)
Genome browser
AA seq
551 aa
AA seq
DB search
MSAKEVRFGNDARGRMVRGINILANAVKVTLGPKGRNVVLDKAFGAPTVTKDGVSVAKEI
ELEDKFENMGAQMVKEVSSQTSDVAGDGTTTATVLAQSIVHEGMKSVTAGMNPMDLKRGI
DKAVIAAVEELRNLSKPCTDSKAIAQVGTISANADESIGQIIADAMEKVGKEGVITVEEG
SSLENALDVVEGMQFDRGYLSPYFINNQQSMSAELDDCFVLLYDKKISNIRDLLPVLEGV
AKASKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGQV
ISEEVGLSLEKASIEDLGRAKKVQVTKENTTIIDGAGNPSDIKARVDQIRAQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALL
RSLGAMRDLKGANHDQDIGIAIARRAMEEPLRQIVMNCGEEPSVVLNKVLEGEGNHGYNA
ATGEYGDLIAMGILDPTKVTRTALQNAASVAGLIITTEAMVAELPKEEKGGAGGGMDDMG
GMGGMGGMGMM
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaaaagaagttcgtttcggtaatgacgcccgcggccggatggttcgcgggatc
aacatcctggccaacgcggtcaaggtcacgctgggtccgaagggccgcaacgtggtgctc
gacaaggccttcggcgctcccaccgtcaccaaggacggcgtgtcggtcgcgaaggagatc
gaactcgaggacaagttcgagaacatgggcgcacagatggtgaaggaggtttcctcccag
acttccgacgtcgccggcgacggtaccaccacggcgaccgtgctggcacagtccatcgtg
cacgaaggcatgaagtcggtgaccgcgggcatgaacccgatggacctgaagcgcggcatc
gacaaggccgtgatcgctgcggtcgaggaactgaggaatctctccaagccctgcaccgac
agcaaggcgatcgcccaggtcggcaccatctccgccaatgcggacgaatcgatcggccag
atcatcgccgatgcgatggagaaggtcggcaaggagggcgtgatcacggtcgaggaaggt
tcttcgctcgagaacgcgctcgacgtggtcgaggggatgcagttcgatcgcggctatctg
tcgccttatttcatcaacaaccagcagagcatgagcgccgagctcgatgactgcttcgtg
ctgctctacgacaagaagatctccaatatccgcgacctgctgcccgtcctggaaggcgtt
gcgaaggccagcaagccgttgctgatcatcgccgaggacgtcgaaggcgaggcgctcgcg
acgctggtcgtgaacacgatgcgtgggatcgtcaaggtcgccgcggtcaaggcgcccggt
ttcggtgaccgccgcaaggcgatgctgcaggatatcgccgtgctgaccggtggccaggtc
atttccgaggaagtgggcctgtcgctggagaaggccagcatcgaggatctcggccgcgcg
aagaaggtccaggtcaccaaggagaacaccacgatcatcgacggtgcgggcaatccgtcg
gacatcaaggcccgggtcgaccagatccgtgcacagatcgaagaagccacctcggactac
gacaaggaaaagctgcaggagcgggtcgcgaagctcgctggcggcgtggcggtgatcaag
gtcggtgccgccaccgaagtcgagatgaaggagaagaaggcacgcgtcgaagatgcgctg
catgcgacccgcgccgcggtggaagaaggcgtggttccgggtggcggtgtcgccctgctg
cgttcgctgggcgcgatgcgcgatctcaagggtgccaaccacgatcaggacatcgggatc
gcgatcgcccgtcgggcgatggaagagccgctgcgccagatcgtgatgaactgcggcgag
gaaccctccgtggtcctgaacaaggttctcgagggtgaagggaaccatggctacaacgcg
gccactggcgagtacggcgacctgatcgcgatggggatcctcgatccgaccaaggtcacc
cggaccgcgctgcagaatgcagcctcggtcgccggcctgatcatcaccaccgaggcgatg
gtcgccgagctgccgaaggaagagaagggcggcgccggcggtggcatggacgacatgggc
ggcatgggtggcatgggcggcatgggtatgatgtaa
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