Thioalkalivibrio paradoxus: THITH_16350
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Entry
THITH_16350 CDS
T03590
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tti
Thioalkalivibrio paradoxus
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tti03009
]
THITH_16350 (rimO)
Enzymes [BR:
tti01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
THITH_16350 (rimO)
Ribosome biogenesis [BR:
tti03009
]
Prokaryotic type
ribosomal protein modification factors
THITH_16350 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AHE99602
UniProt:
W0DQR9
LinkDB
All DBs
Position
complement(3512330..3513646)
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AA seq
438 aa
AA seq
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MSTPQPRIGFVSLGCPKALVDSEQILSRLRAEGYGIAPDYDGADLVIVNTCGFIDAAIAE
SLDAIGEALTENGRVVVTGCLGKDAERIQQTHPGVLAVTGPQAYADVMAAVHEQLPPPHD
PFESLVPAQGVRLTPGHYAYLKISEGCNHRCSFCIIPSLRGDLVSRPIGEVLAEAERLAA
AGVRELLVISQDTSAYGVDLRYRTGFFRGRPMRSDIEQLATALGELGIWVRLHYVYPYPH
VDRLIPLMADGHLLPYLDMPLQHGHPRVLKAMRRPAATERVLERIRGWRERVPDLALRST
FIVGFPGETEAEFEALLEFLQHAQLDRVGAFAYSPVEGAQANALAAPVPEVEKAARLEAF
MQVQADISAARLQRRIGTLQTVLVDAIDEAGTLIARSPAEAPEIDGVVYVEGASAAPGDF
LEVEIVEASDHDLFARPA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
ctgtcaaccccccagccacggatcggcttcgtgagccttgggtgcccgaaagcactggtg
gactcggagcagatcctgtcccgattgcgcgcggagggctacgggatcgctccggattac
gacggtgccgacctggtgatcgtgaacacctgcggcttcatcgatgccgcgatcgccgaa
tcgctcgacgcgatcggggaggcattgaccgagaacggtcgggtggtggtcaccggctgc
ctgggcaaggacgccgagcggatccagcagacccatccgggcgtgctggcggtgaccggc
ccccaggcctacgcggacgtgatggcggccgtgcacgagcagctgccgccgccacacgat
ccgttcgagagcctggtgcccgcgcagggcgtgcggctcacgccggggcattacgcctac
ctgaagatctccgagggctgcaatcaccgctgcagcttctgcatcatcccgagtctgcgc
ggcgatctggtcagccgcccgatcggcgaagtgctggccgaggcggagcggctcgccgca
gccggtgtgcgggaactcctggtgatctcgcaggatacctcggcctacggtgtcgatctc
cgctatcgcacggggttcttccgcgggcggccgatgcgttccgacatcgagcagctggcc
actgcgctgggtgagctcgggatctgggtgcggctgcattacgtctacccctatccgcat
gtcgaccggctgattccgctgatggccgacgggcatttgttgccctatctcgacatgccg
ctacagcacgggcatccgcgggtgctgaaggcgatgcgtcgcccggccgcgaccgagcgg
gtattggagcggatccgcggttggcgcgaacgggtgccggacctcgcgctgcgttcgacc
ttcatcgtcggattccccggggagaccgaggccgagttcgaggcgctgctcgaattcctg
cagcacgcgcagctcgaccgggtcggggccttcgcctattcgccggtcgagggggcgcag
gcgaacgcgctggcggccccggttccggaagtcgagaaggcggcgcgcctggaggcgttc
atgcaggtgcaggccgacatcagtgccgcgcggctgcagcgcagaatcggcacgctgcag
accgtgctggtcgatgccatcgacgaggctgggacgctgatcgcgcgctccccggcggaa
gccccggagatcgacggcgtcgtctacgtcgagggcgcgagcgcagcgccgggcgacttc
ctggaagtcgagatcgtcgaagcctcggaccacgacctgttcgcgcgcccggcctga
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