Thioalkalivibrio paradoxus: THITH_16465
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Entry
THITH_16465 CDS
T03590
Name
(GenBank) RNA polymerase sigma 70
KO
K03089
RNA polymerase sigma-32 factor
Organism
tti
Thioalkalivibrio paradoxus
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tti03021
]
THITH_16465
Transcription machinery [BR:
tti03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
THITH_16465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
UCR_14kD
HTH_3
FhuF
Motif
Other DBs
NCBI-ProteinID:
AHE99622
UniProt:
W0DQU3
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All DBs
Position
3535347..3536210
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AA seq
287 aa
AA seq
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MSQALVRKPVDMPVPVGNLDHYIAAVSRIEVLDAQEEQRLARALRDRQDLDAARQLILHN
LRFVVHVARGYLGYGLPLGDLIQEGNVGLMKAVRRFDPEQGVRLVSFAVHWIRAEIHEFI
LRNWRIVKVATTKAQRKLFFNLRQAKQRLGWLNPGEVTAVARDLGVSESDVLEMESRLSS
RDTSFDPAPEDDEDREHRVPAEHLAGSPEHDPAQVTEDADWNRHFQSRLRESLNALDART
RDILTRRYLSEPKATLHQLAAEYGVSAERIRQIENRAIRSLRETLAA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcattggtgcgcaagcccgtggacatgccggtcccagtcggcaatctggat
cactatatcgccgccgtcagccgcatcgaggtcctcgacgcgcaggaagagcagcgtctg
gcgcgcgcgctacgcgaccggcaggatctggacgcggcacggcaactgatcctgcacaat
ctgcggttcgtcgtccacgtggcccgcggctacctgggctacggcctgccgctgggcgac
ctgattcaggaaggcaatgtcggcctgatgaaggcggtgcgccgcttcgatcccgagcag
ggcgtgcgactggtctcgttcgcggttcactggatccgcgccgagatccacgaattcatt
ctgcgcaactggcggatcgtgaaggtggcgacgaccaaggcgcagcgcaagctgttcttc
aacctccgtcaggccaagcagcgcctgggctggctgaatcccggcgaggtcaccgcggtc
gcccgggatctgggggtgtccgaaagcgacgtgctggagatggagagccgattgtcgagc
cgggataccagtttcgacccggcgccggaagacgacgaagaccgggaacaccgggtaccg
gccgagcacttggccggcagtccggagcacgatccggcgcaagtcacggaagatgccgac
tggaaccgccacttccagtcccggctccgcgagtcgctgaatgcgctggatgcacgcacg
cgcgacatcctgacgcggcgttacctgagcgaaccgaaggccacgctgcaccagctggcg
gccgaatacggcgtgtccgccgagcgcatccgccagatcgaaaaccgcgcgatccgctcc
ctgcgcgaaaccctggcggcatag
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