KEGG   Thioalkalivibrio paradoxus: THITH_16635
Entry
THITH_16635       CDS       T03590                                 
Name
(GenBank) DNA-binding protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
tti  Thioalkalivibrio paradoxus
Brite
KEGG Orthology (KO) [BR:tti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tti03000]
    THITH_16635
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tti02048]
    THITH_16635
Transcription factors [BR:tti03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    THITH_16635
Prokaryotic defense system [BR:tti02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    THITH_16635
SSDB
Motif
Pfam: HTH_3 Peptidase_M78 HTH_26 HTH_31 HTH_25 DUF3071 HTH_28 HTH_23 HTH_24 Sigma70_r4_2 YdaS_toxin FlxA Not3
Other DBs
NCBI-ProteinID: AHE99651
UniProt: W0DMI0
LinkDB
Position
complement(3564986..3566263)
AA seq 425 aa
MIYSDKQYSISSAQLAKLRGALSAAKERTTDQAWLKKAEIDGLKSQIADIEAELAEYDML
KSGQVSFSKTYALEELPRVLVQARIASGMSQTDLAEKLGMKPQQVQRYEATDYMGASLGR
LIEISRALGVKASESFEGPKQATGSLFAWGNADDVVWAQLPYKEMIKRKWLDLPRGADPI
KRVKEYFLRAAGPQVATALHRKKMRSGNVPNEYALLAWQARILERARERIEAGEVGAFEQ
DDRWLPELVRLTKRDDGPKRARDLLAKKGIVLVVERHLPGSYLDGAAMLGDRDTPVVGLT
LRYDRLDNFWFVLMHELGHVFLHLFDGLRFDFFDEEDGNDGDTIEAEADRFALGALISDE
LWDQCLSRFALSEEAVRIDADRIGVDPSILAGRIRKERGDYTILDHLVGQGQVRSQLEEA
SDDLE
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgatctacagcgacaagcaatacagtatctcgagcgcgcaactggcgaagctgcggggc
gcgctctccgcggcaaaggagcgtaccacggatcaggcatggctcaagaaggcggagatc
gacggactcaagagccagatcgccgatatcgaggccgaactggccgaatacgacatgctg
aaatccggccaggtctcgttctccaagacgtatgcccttgaagaattacctcgcgtgttg
gtgcaggcccgcatcgcctccggcatgagccagacggacctcgcggaaaaactcggcatg
aagccccagcaggttcaacgttacgaggcaaccgactacatgggcgctagcctgggaagg
ctgatcgagatttcaagggcgcttggcgtgaaggcctcggaaagcttcgagggacccaag
caggcgaccggatcgctcttcgcctggggcaacgccgacgatgtcgtctgggctcagctc
ccttataaggagatgatcaagcgcaagtggcttgatctgccgcgcggcgctgatccgatc
aagcgcgtgaaggagtacttcctgcgcgcggccgggccgcaggttgcgacggcgcttcat
cgcaagaaaatgcgcagcggaaacgtgccgaatgaatatgccctgctcgcgtggcaagcg
cgcattctggagcgcgcgcgagaaagaatcgaagccggcgaggttggcgccttcgaacag
gatgaccggtggttgccagagcttgtgcgcctgacgaaacgagatgacggacctaagcga
gcgcgcgatctgctagccaagaaaggcatcgtgcttgtcgtcgaacgccacctcccgggc
tcctatctagatggggccgcgatgctcggtgatcgagatacgccagttgtaggtctcact
ctgcgctacgatcggctggacaatttctggttcgtgctgatgcacgagcttggtcacgtc
ttcctgcatctctttgacggactgcgcttcgacttctttgatgaggaagacggcaatgac
ggcgatacgatcgaggcagaggccgatagattcgcgctcggcgcactgatatcggacgag
ttgtgggatcagtgtctctcgcggttcgccttatcggaagaggcggtgaggatcgatgcg
gacaggatcggcgtcgatccgagcatcctcgctggacgcatcaggaaggagcgcggcgac
tacaccattctggatcatctggttggtcagggtcaggtgcgctcgcagcttgaggaggcg
agcgatgatcttgaatag

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