Thioalkalivibrio paradoxus: THITH_17135
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Entry
THITH_17135 CDS
T03590
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tti
Thioalkalivibrio paradoxus
Pathway
tti03030
DNA replication
tti03410
Base excision repair
tti03420
Nucleotide excision repair
tti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THITH_17135
03410 Base excision repair
THITH_17135
03420 Nucleotide excision repair
THITH_17135
03440 Homologous recombination
THITH_17135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tti03032
]
THITH_17135
03400 DNA repair and recombination proteins [BR:
tti03400
]
THITH_17135
Enzymes [BR:
tti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THITH_17135
DNA replication proteins [BR:
tti03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
THITH_17135
DNA repair and recombination proteins [BR:
tti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
THITH_17135
NER (nucleotide excision repair)
GGR (global genome repair) factors
THITH_17135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AHE99732
UniProt:
W0DR73
LinkDB
All DBs
Position
3672698..3675406
Genome browser
AA seq
902 aa
AA seq
DB search
MTENAPLVLVDGSSYLYRAFHALPPLTAPGGEPTGALYGVVGMLRKLRADYGPQRMAVVF
DAPGKTFRDDLYAEYKANRPPMPEELAAQTEPLHELVRALGLPLLCIPGVEADDVIATLA
AQAEARGEPVVISTGDKDLAQLVGDRVTLVNTMNGTVLDRAGVREKFGVDPERIVDLLTL
VGDSVDNVPGVDKVGPKTAAKWLAEYGSLDAVIENADRIKGKVGENLRAALERLALSREL
VTVRRDVDLGIDEHELTLREPDTTRLREMYARFGFRRWLEELEGNDGADSAANPPPDEAQ
ARDYSAIRDEQAFRDLLSRLEHADLVAFDTETTSLDYMQARIVGVSFSVEPGRGWYLPLA
HEGPDAAPQLDRDRTLEQLRPWLESAERAKLGHHLKYDRNVLANHGITLRGIREDTMLES
YVLDAGAHRHDLDSLAERHLGHRMITYEDVAGKGAKQIAFAEVPVARATEYAAEDAEICL
RLHQTLNPRLAGAEGPRSVYHEIELPLVPVLSDMERTGVRVDAELLRAQSAELAQRMDAV
AERAYCEAGGEFNLGSPKQIQEILFDRLGLPVLRRTPKGQPSTAEDVLEQMAAEYPLPRL
ILEHRGLAKLRSTYTERLPERVHPETGRVHTSYHQAVAATGRLSSSDPNLQNIPVRTDEG
RRIRQAFIAEPGQLLLAADYSQIELRIMAHLSQDRGLLEAFAAGEDIHRATAAEVFGLEP
EAVGPDQRRAAKAINFGLIYGMSAFGLARNLGIEQGQAREYIDRYFARYPGVKDYMERAK
ELARDQGYVETLFGRRLYLPEIRSRNPARRAQSERVAINAPMQGTAADIIKRAMLKVAAR
LEDGDLPARMIMQVHDELVLEVREDAVDALRAAVAEDMSGAAELAVDLVVDVGVGANWDA
AH
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaacgcccccctggtgctggtggatggctcgtcgtacctgtatcgagccttc
cacgcgctgccgccgctgaccgcccccggcggcgaaccgaccggcgccctgtacggggtc
gtgggcatgctgcgcaagctccgggccgactacgggccgcaacggatggccgtggtcttc
gatgccccgggcaagaccttccgggacgacctctacgccgagtacaaggcgaaccgcccg
ccgatgcccgaggagctcgcggctcagaccgagccgctgcacgaactggtgcgggcgctg
ggcctgccgttgctgtgcatccccggggtcgaggcagacgacgtgatcgcgaccctggcc
gcgcaggctgaggcacgcggcgagccggtcgtgatttccaccggtgacaaggatctggcg
caactggtcggcgaccgcgtgacgctggtgaacaccatgaacggcaccgtactcgaccgg
gcgggcgtgcgcgagaaattcggcgtcgaccccgaacggatcgtcgacctgctgaccctg
gtcggcgacagcgtcgacaatgtccccggcgtcgacaaggtcggcccgaagaccgcggcg
aagtggctcgccgaatacggcagcctggacgcagtgatcgaaaacgccgaccggatcaag
ggcaaggtcggcgagaacctgcgcgcggcgctggagcggctggcgctgtcgcgcgaactg
gtcaccgtgcggcgcgacgtcgatctgggaatcgacgagcacgaactgacgctgcgcgaa
cccgacaccacgcgcctgcgcgagatgtacgcgcgcttcggtttccggcgctggctggag
gaactcgaaggcaatgacggcgccgactccgccgccaacccgccgccggacgaagcgcaa
gcgcgtgactactccgcgatccgggacgaacaggcgttccgggatctgctgagccgcctg
gaacacgccgatctggtcgcgttcgacaccgagacgaccagcctcgactacatgcaggcc
cggatcgtcggcgtgtcgttcagcgtcgagcccggccggggctggtatctaccactggcg
cacgagggcccggacgccgctccccagctcgaccgcgaccgcacgctcgagcagctgcgc
ccctggctggaatccgcggaacgcgcgaagctcgggcaccacctgaagtacgaccgcaac
gtgctcgccaaccacggcattaccttgcgcggcatccgcgaggacacgatgctcgagtcc
tacgtgctcgacgccggcgcacaccgccacgacctcgacagcctcgccgagcggcacctc
ggccatcgcatgatcacctacgaggacgtcgccggaaagggcgcgaagcagatcgcgttc
gcggaagttccggtggcccgtgcaaccgagtacgcggccgaagacgccgagatctgcctg
cgcctgcaccagacgctgaacccgcgcctcgcgggcgccgagggcccccgttcggtctac
cacgagatcgagctgccgctggtgccggtgctgtccgacatggaacgcaccggcgtccgg
gtcgacgcggaactgctgcgcgcgcagagcgcggaactcgcgcagcgcatggacgcggtc
gccgagcgcgcctactgcgaagccggcggagaattcaacctgggctcgccgaagcagatc
caggagatcctgttcgaccggctcggcctgccggtactgcggcgaaccccgaaagggcag
ccgtccaccgccgaggatgtgctcgagcagatggcggccgaatacccgttgccgcgtctg
atcctcgaacaccgcgggttggccaagctgcgcagcacctacaccgaacgcctgcccgag
cgcgtccaccccgaaaccggacgcgtgcacacgtcctaccaccaggcggtcgcggcaacg
ggccggctgtcgtcgtcggatccgaacctgcagaacattccggtgcgcaccgacgagggc
cgccggatccgccaggcgttcatcgccgaacccgggcaactgctgctggccgcagactat
tcgcagatcgaactgcgcatcatggcgcacctgtcgcaggaccgcggcctgctcgaggca
ttcgctgccggcgaggacatccaccgcgccaccgccgcggaggtcttcgggctggagccc
gaggcggtgggtccggaccagcgccgcgccgcgaaggcgatcaacttcgggctgatctac
ggcatgtcggcattcgggctggcgcgcaacctggggatcgaacagggccaggcgcgcgag
tacatcgaccgctatttcgcgcgttacccgggggtgaaggactacatggaacgcgcgaag
gagctggcccgcgaccaggggtacgtggagacactgttcggccgccgcctgtacctgccc
gagatccgcagccgcaacccggcgcggcgcgcgcagtccgagcgggtcgcgatcaacgca
ccgatgcagggcacggccgcggacatcatcaagcgcgcgatgctgaaggtcgccgcgcgc
ctggaagatggcgacctgccggcgcggatgatcatgcaggtacacgacgagctggtgctc
gaggtgcgggaggacgcggtggacgcgctgcgcgcggcggtggccgaagacatgtccggc
gcggcggagctcgcggtcgatctggtcgtcgatgtcggcgtcggcgcgaactgggatgcc
gcgcattga
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