Thioalkalivibrio paradoxus: THITH_17395
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Entry
THITH_17395 CDS
T03590
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tti
Thioalkalivibrio paradoxus
Pathway
tti03420
Nucleotide excision repair
tti03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
THITH_17395 (uvrD)
03430 Mismatch repair
THITH_17395 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tti03400
]
THITH_17395 (uvrD)
Enzymes [BR:
tti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
THITH_17395 (uvrD)
DNA repair and recombination proteins [BR:
tti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THITH_17395 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
THITH_17395 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
PAH
Motif
Other DBs
NCBI-ProteinID:
AHE99772
UniProt:
W0DRA5
LinkDB
All DBs
Position
3730138..3732321
Genome browser
AA seq
727 aa
AA seq
DB search
MDVSRLLESLNPAQREAVAAPPGPTLVLAGAGSGKTRVLVHRIAWLIEVEGVMPWSLLAV
TFTNKAANEMRGRIETLLGQPVSGLWMGTFHGLAHRLLRQHWQEARLPQSFQILDSDDQL
RLVRRVLRALELDEARWPPRQAQWFINARKDEGRRPDHLPDTGDPVSRQWVRVYTAYEQA
CARAGVVDFAELLLRAVELLRDHEELLEHYRHRFRHLLVDEFQDTNDIQYGWLRLLAGGG
APLFAVGDDDQSIYGWRGARVENLQHFQKDFPGTQVVRLEQNYRSSANILNAANALIRNN
NGRLGKELWTDGQDGAPVRLFAAINEQDEARFVAETIARHVEHGGLHRECAVLYRSNAQS
RVIEDTLFARRIPYRVYGGLRFFERLEIKDALAYLRLVENADDDAAFLRAVNQPPRGIGE
KTLEDLRLRAQQQGLSLIQAAQQAVASEAMPGRARNAVAGFLQLVLRLREEISGKELPDQ
IESAIARSGLREHFANEKGERGQARVENLDELVGAARAFAQDLPVEAETGTLTDFLAHAA
LEAGEGAADPHEDAVQLMTLHSAKGLEFPLVLLTGLEEGLFPNARSLEEPGRLEEERRLA
YVGMTRAQRELYLTHAETRRLYGRESYNMPSRFIGELPAEMIEPLRPQARVQPAGRFAGM
RPGLDARGAAAADAGLAIGSRVRHAKFGEGVITEYEGGGASARVQVNFANAGAKWLVLSF
ARLEPVA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttcccgtctgctcgaatccctgaacccggcccagcgcgaggccgttgccgct
cctcccggtccgaccctggtcctggcgggggcgggcagcggcaagacccgcgtattggtt
caccggatcgcctggctgatcgaggtcgagggcgtgatgccctggagcttgcttgcggtg
acgttcaccaacaaggctgcgaacgagatgcgcgggcgtatcgaaaccctgctcggccag
ccggtcagcggactgtggatgggcacgttccacggcctcgcacaccggctgttgcgccag
cactggcaggaagcccggctgccgcagtcgttccagatcctcgacagcgacgaccagctg
cgcctggtgcgccgcgtgttgcgcgcgctggagctggacgaggcacgctggccgccacgc
caggcgcagtggttcatcaatgcgcgcaaggacgaggggcgccgcccggaccatctgccc
gataccggggacccggtgtcgcgccagtgggtccgcgtctacaccgcctacgagcaagcc
tgtgcgcgggccggggtggtcgatttcgcggaactgctgctgcgcgcagtggaattgctg
cgcgaccacgaggaactgctggaacactaccggcaccggttccggcatctgctggtcgac
gagttccaggacaccaacgacatccagtacggctggctgcggctgttggcgggtggcggc
gctccgctgttcgcggtgggcgacgacgaccagtcgatctacggctggcgcggcgcgcgc
gtcgagaacctgcagcatttccagaaggattttcccgggacccaggtggtgcggctggaa
cagaactaccggtccagcgccaacatcctgaatgcggccaacgcgctgatccgcaacaac
aacggacggctcggaaaggaattgtggaccgacggacaggacggcgctccggtacgcttg
ttcgctgcgatcaacgaacaggacgaggcgcgcttcgtcgccgagacgatcgcgcgccac
gtcgaacacggcggcctgcaccgcgaatgcgcggtgctgtaccgttccaacgcgcagtcg
cgggtgatcgaggacacgctgttcgcccggcgcatcccctaccgggtctatggcggcctt
cgcttcttcgagcggctcgagatcaaggatgcactggcctacctgcgcctggtcgagaac
gccgacgacgatgccgcgttcctgcgagcggtgaaccagcccccgcgcggaatcggcgag
aagacgctggaggatctgcgcctgcgggcccagcagcaggggctcagcctgatccaggca
gcgcaacaggcggtggcctcggaagccatgccggggcgcgcgcgcaatgcggtcgccgga
ttcctgcagctcgtgctgcggctgcgcgaggagatttccggaaaggagctgccggaccag
atcgagtcggcgatcgcgcgctcgggcctgcgcgagcatttcgcgaacgagaagggcgag
cgcggccaggctcgcgtcgagaacctcgacgaactcgtcggcgccgcgcgcgccttcgcc
caggatctgccggtggaagccgaaaccggcacgctgaccgatttcctcgcgcatgccgca
ctcgaggccggcgagggtgctgccgacccgcacgaggatgcggtgcagctgatgaccctg
cattcggccaaggggctggagtttccgctggttctgctgaccggcctcgaggaagggctg
tttccgaacgcccgctcgctcgaggaaccgggccggctggaggaggaacgccggcttgcc
tacgtcggcatgacccgggcgcagcgggaactgtacctgacccatgccgagacccggcgc
ctgtacggccgggagtcgtacaacatgccgtcgcgcttcatcggcgaactgcccgcggaa
atgatcgaaccgctgcggccgcaggcgcgcgtgcagccggccgggcgcttcgccgggatg
cgcccggggctggatgcgcgcggcgccgcggccgccgatgcgggcctcgcgatcggcagc
cgggtccgccacgcgaagttcggcgagggggtcatcaccgagtacgagggcggtggcgcc
tcggcccgggtccaggtgaacttcgccaacgccggtgcgaagtggctggtgctgagcttc
gcccggctggaacccgtcgcctga
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