Thermus thermophilus HB8: TTHA0788
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Entry
TTHA0788 CDS
T00220
Symbol
TTHA0788
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ttj
Thermus thermophilus HB8
Pathway
ttj03030
DNA replication
ttj03430
Mismatch repair
ttj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TTHA0788 (TTHA0788)
03430 Mismatch repair
TTHA0788 (TTHA0788)
03440 Homologous recombination
TTHA0788 (TTHA0788)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttj03032
]
TTHA0788 (TTHA0788)
03400 DNA repair and recombination proteins [BR:
ttj03400
]
TTHA0788 (TTHA0788)
Enzymes [BR:
ttj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TTHA0788 (TTHA0788)
DNA replication proteins [BR:
ttj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TTHA0788 (TTHA0788)
DNA repair and recombination proteins [BR:
ttj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TTHA0788 (TTHA0788)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
HP_1247_M
Hda_lid
DUF8517
GGDEF_2
HP_1247_C
NCOA6_TRADD-N
Motif
Other DBs
NCBI-ProteinID:
BAD70611
UniProt:
Q5SMG4
LinkDB
All DBs
Position
1:complement(754477..755355)
Genome browser
AA seq
292 aa
AA seq
DB search
MVIAFTGDPFLAREALLEEARLRGLSRFTEPTPEALAQALAPGLFGGGGAMLDLREVGEA
EWKALKPLLESVPEGVPVLLLDPKPSPSRAAFYRNRERRDFPTPKGKDLVRHLENRAKRL
GLRLPGGVAQYLASLEGDLEALERELEKLALLSPPLTLEKVEKVVALRPPLTGFDLVRSV
LEKDPKEALLRLRRLKEEGEEPLRLLGALSWQFALLARAFFLLRENPRPKEEDLARLEAH
PYAARRALEAAKRLTEEALKEALDALMEAEKRAKGGKDPWLALEAAVLRLAG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcgccttcaccggggatcccttcctggcgcgggaggccctcttagaggaggcc
aggcttaggggcctttcccgcttcaccgagcccaccccggaggccctggcccaggccctg
gccccagggcttttcgggggcgggggggcgatgctggacctgagggaggtgggggaggcg
gagtggaaggccctaaagccccttttggaaagcgtgcccgagggcgtccccgtcctcctc
ctggaccctaagccaagcccctcccgggcggccttctaccggaaccgggaaaggcgggac
ttccccacccccaaggggaaggacctggtgcggcacctggaaaaccgggccaagcgcctg
gggctcaggctcccgggcggggtggcccagtacctggcctccctggagggggacctcgag
gccctggagcgggagctggagaagcttgccctcctctccccacccctcaccctggagaag
gtggagaaggtggtggccctgaggccccccctcacgggctttgacctggtgcgctccgtc
ctggagaaggaccccaaggaggccctcctgcgcctcaggcgcctcaaggaggagggggag
gagcccctcaggctcctcggggccctctcctggcagttcgccctcctcgcccgggccttc
ttcctcctccgggaaaaccccaggcccaaggaggaggacctcgcccgcctcgaggcccac
ccctacgccgcccgccgcgccctggaggcggcgaagcgcctcacggaagaggccctcaag
gaggccctggacgccctcatggaggcggaaaagagggccaagggggggaaagacccgtgg
ctcgccctggaggcggcggtcctccgcctcgccggttga
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