Thermus thermophilus HB8: TTHA0834
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Entry
TTHA0834 CDS
T00220
Symbol
TTHA0834
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ttj
Thermus thermophilus HB8
Pathway
ttj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ttj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TTHA0834 (TTHA0834)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttj03400
]
TTHA0834 (TTHA0834)
Enzymes [BR:
ttj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
TTHA0834 (TTHA0834)
DNA repair and recombination proteins [BR:
ttj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TTHA0834 (TTHA0834)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
BAD70657
UniProt:
Q5SK18
Structure
PDB
PDBj
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All DBs
Position
1:complement(799876..800688)
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AA seq
270 aa
AA seq
DB search
MPRYGFHLSIAGKKGVAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREA
SGGLPAVIHASYLVNLGAEGELWEKSVASLADDLEKAALLGVEYVVVHPGSGRPERVKEG
ALKALRLAGVRSRPVLLVENTAGGGEKVGARFEELAWLVADTPLQVCLDTCHAYAAGYDV
AEDPLGVLDALDRAVGLERVPVVHLNDSVGGLGSRVDHHAHLLQGKIGEGLKRVFLDPRL
KDRVFILETPRGPEEDAWNLRVFRAWLEEA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgctacgggttccacctttccatcgccgggaaaaagggcgtggccggggcggtg
gaggaagccaccgccctcggcctcaccgctttccagatcttcgccaaaagcccgcggagc
tggcgcccaagggccctctccccggccgaggtggaggccttccgcgccttaagggaggcc
tccgggggcctccccgccgtgatccacgcctcctacctggtcaacctgggggcggagggg
gagctttgggagaagagcgtggcgagcctggcggacgacctggagaaggccgccctcctc
ggggtggagtacgtggtcgtccaccccggctcgggccgccccgagcgggtcaaggaaggg
gccctcaaggccctgcgcctcgccggcgtccgctcccgccccgtcctcctcgtggagaac
accgctgggggtggggagaaggtgggggcgcggtttgaggagctcgcctggctcgtggcg
gacacccccctccaggtctgcctggacacctgccacgcctacgccgccgggtacgacgtg
gccgaggaccccttgggggtcctggacgccttggaccgggccgtgggcctggagcgggtg
cccgtggtccacctcaacgactccgtgggcggcctcggaagccgcgtggaccaccacgcc
cacctcctccagggaaagatcggggaggggctcaagcgcgtctttttggacccgaggctc
aaggaccgggtcttcatcctggaaacccccaggggaccggaggaggacgcctggaacctc
cgggtctttagggcctggctcgaggaggcctaa
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