Thermus thermophilus HB8: TTHA1054
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Entry
TTHA1054 CDS
T00220
Symbol
TTHA1054
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ttj
Thermus thermophilus HB8
Pathway
ttj03030
DNA replication
ttj03410
Base excision repair
ttj03420
Nucleotide excision repair
ttj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TTHA1054 (TTHA1054)
03410 Base excision repair
TTHA1054 (TTHA1054)
03420 Nucleotide excision repair
TTHA1054 (TTHA1054)
03440 Homologous recombination
TTHA1054 (TTHA1054)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttj03032
]
TTHA1054 (TTHA1054)
03400 DNA repair and recombination proteins [BR:
ttj03400
]
TTHA1054 (TTHA1054)
Enzymes [BR:
ttj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TTHA1054 (TTHA1054)
DNA replication proteins [BR:
ttj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TTHA1054 (TTHA1054)
DNA repair and recombination proteins [BR:
ttj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TTHA1054 (TTHA1054)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TTHA1054 (TTHA1054)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
Taq-exonuc
5_3_exonuc
HHH_5
TraI_hel_assoc_N
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BAD70877
UniProt:
P52028
Structure
PDB
PDBj
LinkDB
All DBs
Position
1:996840..999344
Genome browser
AA seq
834 aa
AA seq
DB search
MEAMLPLFEPKGRVLLVDGHHLAYRTFFALKGLTTSRGEPVQAVYGFAKSLLKALKEDGY
KAVFVVFDAKAPSFRHEAYEAYKAGRAPTPEDFPRQLALIKELVDLLGFTRLEVPGYEAD
DVLATLAKKAEKEGYEVRILTADRDLYQLVSDRVAVLHPEGHLITPEWLWEKYGLRPEQW
VDFRALVGDPSDNLPGVKGIGEKTALKLLKEWGSLENLLKNLDRVKPENVREKIKAHLED
LRLSLELSRVRTDLPLEVDLAQGREPDREGLRAFLERLEFGSLLHEFGLLEAPAPLEEAP
WPPPEGAFVGFVLSRPEPMWAELKALAACRDGRVHRAADPLAGLKDLKEVRGLLAKDLAV
LASREGLDLVPGDDPMLLAYLLDPSNTTPEGVARRYGGEWTEDAAHRALLSERLHRNLLK
RLEGEEKLLWLYHEVEKPLSRVLAHMEATGVRLDVAYLQALSLELAEEIRRLEEEVFRLA
GHPFNLNSRDQLERVLFDELRLPALGKTQKTGKRSTSAAVLEALREAHPIVEKILQHREL
TKLKNTYVDPLPSLVHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAF
VAEAGWALVALDYSQIELRVLAHLSGDENLIRVFQEGKDIHTQTASWMFGVPPEAVDPLM
RRAAKTVNFGVLYGMSAHRLSQELAIPYEEAVAFIERYFQSFPKVRAWIEKTLEEGRKRG
YVETLFGRRRYVPDLNARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRLREMGAR
MLLQVHDELLLEAPQARAEEVAALAKEAMEKAYPLAVPLEVEVGMGEDWLSAKG
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatgcttccgctctttgaacccaaaggccgggtcctcctggtggacggccac
cacctggcctaccgcaccttcttcgccctgaagggcctcaccacgagccggggcgaaccg
gtgcaggcggtctacggcttcgccaagagcctcctcaaggccctgaaggaggacgggtac
aaggccgtcttcgtggtctttgacgccaaggccccctccttccgccacgaggcctacgag
gcctacaaggcggggagggccccgacccccgaggacttcccccggcagctcgccctcatc
aaggagctggtggacctcctggggtttacccgcctcgaggtccccggctacgaggcggac
gacgttctcgccaccctggccaagaaggcggaaaaggaggggtacgaggtgcgcatcctc
accgccgaccgcgacctctaccaactcgtctccgaccgcgtcgccgtcctccaccccgag
ggccacctcatcaccccggagtggctttgggagaagtacggcctcaggccggagcagtgg
gtggacttccgcgccctcgtgggggacccctccgacaacctccccggggtcaagggcatc
ggggagaagaccgccctcaagctcctcaaggagtggggaagcctggaaaacctcctcaag
aacctggaccgggtaaagccagaaaacgtccgggagaagatcaaggcccacctggaagac
ctcaggctctccttggagctctcccgggtgcgcaccgacctccccctggaggtggacctc
gcccaggggcgggagcccgaccgggaggggcttagggccttcctggagaggctggagttc
ggcagcctcctccacgagttcggcctcctggaggcccccgcccccctggaggaggccccc
tggcccccgccggaaggggccttcgtgggcttcgtcctctcccgccccgagcccatgtgg
gcggagcttaaagccctggccgcctgcagggacggccgggtgcaccgggcagcagacccc
ttggcggggctaaaggacctcaaggaggtccggggcctcctcgccaaggacctcgccgtc
ttggcctcgagggaggggctagacctcgtgcccggggacgaccccatgctcctcgcctac
ctcctggacccctccaacaccacccccgagggggtggcgcggcgctacgggggggagtgg
acggaggacgccgcccaccgggccctcctctcggagaggctccatcggaacctccttaag
cgcctcgagggggaggagaagctcctttggctctaccacgaggtggaaaagcccctctcc
cgggtcctggcccacatggaggccaccggggtacggctggacgtggcctaccttcaggcc
ctttccctggagcttgcggaggagatccgccgcctcgaggaggaggtcttccgcttggcg
ggccaccccttcaacctcaactcccgggaccagctggaaagggtgctctttgacgagctt
aggcttcccgccttggggaagacgcaaaagacaggcaagcgctccaccagcgccgcggtg
ctggaggccctacgggaggcccaccccatcgtggagaagatcctccagcaccgggagctc
accaagctcaagaacacctacgtggaccccctcccaagcctcgtccacccgaggacgggc
cgcctccacacccgcttcaaccagacggccacggccacggggaggcttagtagctccgac
cccaacctgcagaacatccccgtccgcacccccttgggccagaggatccgccgggccttc
gtggccgaggcgggttgggcgttggtggccctggactatagccagatagagctccgcgtc
ctcgcccacctctccggggacgaaaacctgatcagggtcttccaggaggggaaggacatc
cacacccagaccgcaagctggatgttcggcgtccccccggaggccgtggaccccctgatg
cgccgggcggccaagacggtgaacttcggcgtcctctacggcatgtccgcccataggctc
tcccaggagcttgccatcccctacgaggaggcggtggcctttatagagcgctacttccaa
agcttccccaaggtgcgggcctggatagaaaagaccctggaggaggggaggaagcggggc
tacgtggaaaccctcttcggaagaaggcgctacgtgcccgacctcaacgcccgggtgaag
agcgtcagggaggccgcggagcgcatggccttcaacatgcccgtccagggcaccgccgcc
gacctcatgaagctcgccatggtgaagctcttcccccgcctccgggagatgggggcccgc
atgctcctccaggtccacgacgagctcctcctggaggccccccaagcgcgggccgaggag
gtggcggctttggccaaggaggccatggagaaggcctatcccctcgccgtgcccctggag
gtggaggtggggatgggggaggactggctttccgccaagggttag
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