Thermus thermophilus HB8: TTHA1288
Help
Entry
TTHA1288 CDS
T00220
Symbol
TTHA1288
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ttj
Thermus thermophilus HB8
Brite
KEGG Orthology (KO) [BR:
ttj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttj03400
]
TTHA1288 (TTHA1288)
DNA repair and recombination proteins [BR:
ttj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TTHA1288 (TTHA1288)
Archaeal homologous recombinant proteins
TTHA1288 (TTHA1288)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
ABC_tran
AAA_21
FapA
ABC_ATPase
T2SSE
AAA_15
NACHT
NTPase_1
nSTAND3
DUF87
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BAD71111
UniProt:
Q5SIS6
LinkDB
All DBs
Position
1:complement(1228724..1231624)
Genome browser
AA seq
966 aa
AA seq
DB search
MRPLRLELEGFGPYRERQAVDFSDVELFAITGPTGSGKSTLLDAIAFALYGQVPRVGRQV
GTLKHPAAAKAWVSLTFRVGERVYRVERSRSEKRGDARVYLLEGGERLLDLPTLEAVNRA
LADLVGLDYEAFTRALLLPQGEFDRFLKGEPKERRQLLLELFELSRLERARQKAAERRGL
LLEEKGRLEGELNGLSAATPEALEELERALAASRAEAARLEEEARGVRKALAEAEALLED
LRRRQALAARLEALKARAEEMARVEERLSRAEEAERALPLWRDYQKKRAALQATEKALEE
AEGRLRALEARREALGFSPEALERAQAAYAEAQDLKAFEALLARAPAGKAPASGPDPATA
QARLEEVLKALEALGAELLRLRAWAEAWEALRAKEAALAEVGEALARLEAEGKEAREARD
ALALRLKEAEAHALSQALKALEAERKALEKAQEDLDRRREALLREERRLGLLAYHDLLEP
GKPCPLCGGVVHALPPLPEVPDLAGARRALEEEAQALARRLARLEAEAGDLAARLRALEV
EPRPGDPEALKGALEAAEARLQDLRDRYQALRGEARALEREVAALRAREAEARGGASRED
LASRLEAAEARRLALEEEAGRLAAGLRRHLEAKTGGLGVGPYLRRLKEEVERLKGLAAED
ARLREEAGALRAELSALRARKEEQAKALAEAEAATRGLMPEAEAQGLALSPGEREALRAE
LEAFRKDLAEAEAAWRSLPPLSGPAPTLEEAQGRVEALRKALAELEGRLEEKRKEEGALE
DRVERLRKDLARRREVEGALARLVAELALWEKLALDLQAHNFPAYLLGLKQRSLVERASE
LLYTLSGGRYRFAAQGDEYLVVDLWAEATARQVRTLSGGESFLASLALALALSEELSRGK
LEALFLDEGFGTLDPEALELVAGILESLPTRGRLVGVVTHVEALAERFPARLRVRKHPWG
SRVEWA
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcccttacggcttgagctggaggggttcggcccctaccgggagcgccaggcggtg
gacttctccgacgtggagctcttcgccatcaccgggcccacggggagcgggaagagcacc
cttttggacgccatcgcctttgccctctacggccaggtgccccgggtggggcgccaggtg
ggcaccctcaagcaccccgccgcggccaaggcctgggtgagcctcaccttccgggtaggg
gagcgggtctaccgggtggagcggtcccggagcgagaagcggggggacgcccgggtctac
ctgctggaggggggggagcggcttctggacctgcccaccctcgaggcggtcaaccgggcc
ttggccgacctcgtgggcctggactacgaggccttcacccgggccctcctcctcccccag
ggggagtttgaccgcttcctcaagggggagccgaaggaaaggcgccagctccttctggag
ctctttgagctctcccgcctggagcgggccaggcagaaggcggcggagaggcggggcctc
ctcctggaggagaaggggaggctggagggggagctcaacgggctttccgcggccaccccg
gaggcgcttgaggagctggagcgggcgcttgccgcctcccgcgcggaggccgcccgcctg
gaggaggaggccaggggggtgaggaaggccctggccgaggcggaggccctgcttgaggac
ctgaggcggcgccaggctttggcggcccgcctcgaggccttaaaggcccgggcggaggag
atggcccgggtggaggagcggctttcccgggcggaggaggcggagcgggccctgcccctt
tggcgggactaccaaaagaagcgggccgccctccaggccacggaaaaggccctggaggag
gctgaggggaggcttcgggccctggaggcgaggcgcgaggccctcggcttctctccggag
gccctggagcgagcccaggcggcctacgccgaggcccaggacctaaaggccttcgaggcc
ctcctcgcccgggcgcccgcagggaaggcccccgcctcgggtcccgaccccgccacggcc
caggcgcgcctggaggaggtcctgaaggccctggaggccctcggggcggagcttttgcgc
ctgagggcctgggcggaggcctgggaggccttgagggcgaaggaggccgctttggcggag
gtgggggaggcccttgcccgcctggaggcggagggaaaggaggcgcgggaggcccgggac
gccctcgccctgaggctcaaggaggcggaggcccacgccctctcccaggccctgaaggcc
ctggaggccgagcggaaggccctggagaaggcccaggaggacctggaccggaggcgggag
gccctccttcgggaggagcggaggctcggcctcctcgcctaccacgacctcctggagccg
ggcaagccctgccccctctgcgggggggtggtccacgccctcccccccttgcccgaggtc
cccgacctcgccggggcgcggcgggccctggaggaggaggcccaggccctcgcccggcgc
ctcgcccgcctggaggcggaggccggggacctcgccgcccgcctccgggccctcgaggtg
gagccccggcccggggatcccgaggcgctcaaaggggccttggaggcggccgaggcccgg
cttcaggacctccgggaccggtaccaggccctccggggggaggcccgggccctggagcgg
gaggtggcggccttgcgggcgcgggaggccgaggcccggggcggggccagccgggaggac
ctggcctcgaggctggaggcggccgaggcccggcgccttgccctggaggaggaggcgggg
aggctcgccgctgggcttcgccgccacctggaggccaagacggggggcctgggggtgggg
ccttacctgaggcgcctgaaggaggaggtggagcggctcaaggggcttgccgccgaggac
gcccgccttagggaggaggcgggggcccttagggcggagctttccgccttgagggcccgc
aaggaggagcaggccaaggccctggccgaggcggaggcggccacccggggcctcatgccc
gaggcggaggcccaaggcctcgccctctccccgggggagcgggaggcgcttcgggcggag
ctcgaggccttccgcaaagacctcgcggaggcggaggccgcctggagaagccttcccccc
ctttctgggcccgcccccaccctggaggaggcccaggggcgggtggaggccctgaggaag
gcgcttgccgagctggagggccgtctggaggagaagcgcaaggaggaaggggccctggaa
gaccgggtggaaaggctccggaaggacctcgcccgccgccgggaggtggagggggcgctc
gcccgcctcgtggccgagctcgccctttgggagaagctcgccctggacctccaggcccac
aacttccccgcctacctcctcggcctcaagcagcggagcctggtggagcgggcgagcgaa
cttctctacaccctctccggggggcggtaccgcttcgcggcccaaggggacgagtacctg
gtggtggacctctgggccgaggccaccgcccgccaggtccggaccctctcgggcggggag
agcttcctcgcgagccttgccctggccctcgccctctcggaggagctttcccggggcaag
ctggaggccctcttcctggacgagggcttcggcaccctggaccccgaggccctggagctg
gtggcgggcatcctggaaagcctccccacccgggggcggctcgtgggcgtggtgacccac
gtggaggctttggccgagcgcttccccgcccggcttagggtccggaagcacccttgggga
agccgggtggagtgggcgtag
DBGET
integrated database retrieval system
