Thermus thermophilus HB8: TTHA1289
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Entry
TTHA1289 CDS
T00220
Symbol
TTHA1289
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ttj
Thermus thermophilus HB8
Brite
KEGG Orthology (KO) [BR:
ttj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttj03400
]
TTHA1289 (TTHA1289)
DNA repair and recombination proteins [BR:
ttj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TTHA1289 (TTHA1289)
Archaeal homologous recombinant proteins
TTHA1289 (TTHA1289)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
BAD71112
UniProt:
Q5SIS5
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All DBs
Position
1:complement(1231605..1232723)
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AA seq
372 aa
AA seq
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MRLLHTADWHLGKLLKGVDRTPEIAAALRDLLGLVRSERVDLVVVSGDLFDRPQVSAEAE
ACAVEFFMELKALGVPALVIAGNHDPKERLEALAPLLGLAGARVRGRLLFAEEGGVVEVG
GVRAGLLPFVSERLLVRRLFQEDEVLHRTYAEALRRVLDNLKSPLLLGHFAVEGARPGGG
EFVFHLVGSYAVPRASLPLEVRYLALGHVHRQQQVSEAPVAWYPGSLVQLDFGEGEGAER
GALLVELPPSGPPRVHPIPGRWGKPLRTYRLRPEELDGRMGELERFPGYLRLVVEGRLSP
QVKENLFRALPHLLAVEGAPLQAGEGRREEVQDLGFVEGYARYLEERGRKEEALLERFAE
VLAEVEGEALTA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttctccacaccgccgactggcacctgggcaagctcctcaagggggtggaccgg
accccggagatcgccgccgccctccgggaccttctgggcctggtccggtccgagcgggtg
gacctggtggtggtctccggggacctgtttgaccggccccaggtttcggcggaggccgag
gcttgcgcggtggagttcttcatggagctcaaggcccttggggtcccggccctggtcatc
gccggcaaccacgaccccaaagagcgcctcgaggccctcgccccccttctcgggcttgcg
ggggcccgggtccggggccgcctcctcttcgccgaggagggaggggtggtggaggtgggc
ggggtgcgggcggggcttctgcccttcgtttccgagcgcctcctcgtccggcgcctcttc
caggaggacgaggtcctgcaccgcacctacgccgaggccctgcgccgggtgctggacaac
ctcaaaagccctcttctcctgggccacttcgccgtggagggggcgaggcccgggggaggg
gagttcgtcttccacctggtgggaagctacgccgtcccccgggcgagcctgcctttggag
gtccgctacctcgccctgggccacgtccaccggcaacagcaggtgagcgaggcccccgtg
gcctggtacccgggaagcctggtgcagctggactttggcgagggggagggggcggagcgg
ggggcgctcctcgtggagcttcccccctcggggccgccccgggtccaccccatcccgggg
cggtgggggaagcccctcaggacctaccgcctgcggcccgaggagctggacgggaggatg
ggcgagttggagcgctttcccggctacctgcgcctggtggtggaggggaggctttccccc
caggtcaaggagaaccttttccgggccctcccccacctcctcgccgtggagggcgccccg
ctccaggctggggaggggaggcgggaggaggtgcaggacctcggcttcgtggagggctac
gcccgctacctggaggagcggggaaggaaggaggaggccctgctggagcgcttcgctgag
gtgctggcggaggtggagggtgaggcccttacggcttga
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