Thermus thermophilus HB8: TTHA1534
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Entry
TTHA1534 CDS
T00220
Symbol
TTHA1534
Name
(GenBank) ribonuclease II family protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ttj
Thermus thermophilus HB8
Brite
KEGG Orthology (KO) [BR:
ttj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ttj03016
]
TTHA1534 (TTHA1534)
Enzymes [BR:
ttj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
TTHA1534 (TTHA1534)
Transfer RNA biogenesis [BR:
ttj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TTHA1534 (TTHA1534)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
BAD71357
UniProt:
Q5SI46
LinkDB
All DBs
Position
1:1459112..1460908
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AA seq
598 aa
AA seq
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MAVKQALVVYKGKPALAEEKGGRLELTLEGGARLRVRPKDVLFLHPGPASLGLKVPEGEE
EAAWELLEGQTVSLRELAELVYGAYTPEAALGAYLLAQKGERFVLEGEGVRARTREELRA
LEEAERKRAERERAFQEALKRLKEGSPAPEDRPLLAEVEALARGERKESPVLRALNLPET
PEAAHAFLLRLGLWQRENPHPRRLGLPLQPPDLPAPPLPEEDRVDLTHLPAFAIDDEGSQ
DPDDAVFAEKVEGGFRLFVHVADVAALVPPKSPLDEEALRRGANLYLPEGTVPMLPPAVT
EALGLGLREVSPALTFELWVSEEGELLEERVYPSWVRVTRLTYREALGVEALRPLEALAE
AFRAKRLAAGALEIALPEVKVRVEGEEVRITPLPPYPSRVWVREAMLLAGYAAAHLAVRE
GLPFPFATQEAPARRVEGEGLAAMWEQRKALKRAQLKAVPAPHKGLGLPLYAQVTSPLRR
YLDLVAHQQLRAWLKGERPLSQAEVLERVGAAEAVADLVREAERKSKLHWTLLHLEAKGY
EGPGVLVERRGGQGVFLLPELGLSAQVALPKALPLNAEARLRFLEADLPALEARFALV
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcaagcaagcccttgtcgtctacaaaggcaaacccgccctcgccgaggagaag
gggggccgcttggagctcacgctggaaggaggcgcaaggctgagggtgcgtcccaaggac
gtcctcttcctccacccggggcccgcctccttaggcctgaaggtgcccgagggagaggag
gaggccgcctgggaactcctggaggggcagacggtgagccttagggagctcgccgagctg
gtctacggggcctacaccccggaggccgctctgggcgcctacctcctcgcccagaagggg
gagcgcttcgtcctcgagggggaaggggtccgggcccgcacccgggaggagcttcgggcc
ttagaggaggcggaaaggaagcgggccgagcgggaacgggccttccaggaggccctgaag
cgcctaaaggagggaagccccgcccccgaggaccgccccctcctcgccgaggtggaggcc
ctggcccggggggagaggaaggaaagccccgtcctccgggccctgaacctccccgaaacc
cccgaggcggcccacgccttcctcctccgcctgggcctttggcaaagggaaaacccccac
ccaaggaggctcggccttcccctccagcccccggacctccccgccccacccctccccgag
gaggaccgggtggacctcacccacctccccgccttcgccatagacgacgagggaagccag
gaccccgacgacgccgtcttcgccgagaaggtggaagggggcttccgcctcttcgtccac
gtggccgacgtggccgccctcgtcccccccaaaagccccctggacgaggaggccctgcgc
cggggggcgaacctctacctccccgagggaaccgtgcccatgctcccccccgccgtcacc
gaggccctcggcctgggcctaagggaggtctccccggccctcacctttgagctatgggtc
tcggaggagggggagcttctggaggagagggtctacccctcctgggtacgggtcacgcgc
ctcacctaccgggaggccctgggggtggaggccctgaggcccctggaggccctggcggag
gccttccgggcgaagcgcctcgccgcgggcgccctggagatcgccctccccgaggtgaag
gtgcgggtggagggggaggaggtccggatcacccccttgcccccctacccaagccgcgtc
tgggtgcgggaggccatgctcctcgccgggtacgccgcggcccacctggcggtgcgggag
gggcttcccttccccttcgccacccaggaggcccccgcaaggcgggtggagggggagggg
cttgccgccatgtgggagcagcggaaggccctgaagcgggcccagctcaaggcggtgccc
gccccccacaagggcttaggccttcccctctacgcccaggtgacgagccccctaaggcgc
tacctggacctggtggcccaccagcagctcagggcctggctcaaaggggagaggcccctc
tcccaggccgaggtcctggaaagggtgggggcggcggaggcggtggccgacctggtgcgg
gaggcggagcgcaagagcaagctccactggaccctcctccacctcgaggccaagggttac
gaggggcccggcgtcctggtggaaaggcggggggggcagggggtcttcctcctccccgag
ctcgggctttccgcccaggtggccctgcccaaggcccttcccctgaacgccgaggcccgc
ctccgcttcctggaggcggaccttccggccctcgaggcccgcttcgccctggtctag
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