Thermus thermophilus HB8: TTHA1561
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Entry
TTHA1561 CDS
T00220
Symbol
TTHA1561
Name
(GenBank) probable DNA-directed RNA polymerase omega chain (RpoZ)
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ttj
Thermus thermophilus HB8
Pathway
ttj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ttj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TTHA1561 (TTHA1561)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttj03021
]
TTHA1561 (TTHA1561)
03400 DNA repair and recombination proteins [BR:
ttj03400
]
TTHA1561 (TTHA1561)
Enzymes [BR:
ttj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TTHA1561 (TTHA1561)
Transcription machinery [BR:
ttj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TTHA1561 (TTHA1561)
DNA repair and recombination proteins [BR:
ttj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TTHA1561 (TTHA1561)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
AstB
Motif
Other DBs
NCBI-ProteinID:
BAD71384
UniProt:
Q8RQE7
Structure
PDB
PDBj
LinkDB
All DBs
Position
1:complement(1485216..1485515)
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AA seq
99 aa
AA seq
DB search
MAEPGIDKLFGMVDSKYRLTVVVAKRAQQLLRHGFKNTVLEPEERPKMQTLEGLFDDPNA
VTWAMKELLTGRLVFGENLVPEDRLQKEMERLYPVEREE
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccgggcattgacaagctcttcggcatggtggactccaagtaccggctcacc
gtggtggtggccaaaagggcgcagcagctcctccgccacggcttcaagaacacggtcttg
gagccggaggagaggcccaagatgcagaccctcgaggggctttttgacgaccccaacgcc
gtgacctgggccatgaaggagctcctcacgggccggttggtcttcggcgagaacctggtg
cccgaggaccggctccaaaaggagatggagcggctctacccggtggagcgggaggagtag
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