Thermus thermophilus HB8: TTHA1664
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Entry
TTHA1664 CDS
T00220
Symbol
TTHA1664
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ttj
Thermus thermophilus HB8
Pathway
ttj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ttj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TTHA1664 (TTHA1664)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttj03021
]
TTHA1664 (TTHA1664)
03400 DNA repair and recombination proteins [BR:
ttj03400
]
TTHA1664 (TTHA1664)
Enzymes [BR:
ttj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TTHA1664 (TTHA1664)
Transcription machinery [BR:
ttj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TTHA1664 (TTHA1664)
DNA repair and recombination proteins [BR:
ttj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TTHA1664 (TTHA1664)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RNA_pol_L_2
HHH_8
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
BAD71487
UniProt:
Q5SHR6
Structure
PDB
PDBj
LinkDB
All DBs
Position
1:complement(1576710..1577657)
Genome browser
AA seq
315 aa
AA seq
DB search
MLDSKLKAPVFTVRTQGREYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIED
VLHEFSTIPGVKEDVVEIILNLKELVVRFLNPSLQTVTLLLKAEGPKEVKARDFLPVADV
EIMNPDLHIATLEEGGRLNMEVRVDRGVGYVPAEKHGIKDRINAIPVDAVFSPVRRVAFQ
VEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHLTYFSNPQAAAVAAPEEAK
EPEAPPEQEEELDLPLEELGLSTRVLHSLKEEGIESVRALLALNLKDLKNIPGIGERSLE
EIKEALEKKGFTLKE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttggattccaagctcaaggccccggtcttcacggtgcgcacccaggggcgggagtac
ggggagttcgtcctggagcccctggagcggggcttcggcgtcaccctgggaaaccccctg
cggcgcatcctcctttcctccatccctgggaccgcggtcaccagcgtctacattgaggac
gtcctccacgagttctccaccatccccggggtcaaggaggacgtggtggagatcatcctc
aacctcaaggagctggtggtccggttcctgaaccccagcctccagaccgtgaccctcctc
ctcaaggccgagggccccaaggaggtgaaggcgcgggacttccttcccgtggccgacgtg
gagatcatgaaccccgacctccacatcgccaccctggaggaggggggtcggctcaacatg
gaggtccgggtggaccggggggtggggtacgtcccggcggagaagcacggcatcaaggac
cggatcaacgccatcccggtggacgccgtcttctccccggtgcgccgcgtggccttccag
gtggaggacacccgcctggggcagcgcaccgacctggacaagctcaccctcaggatctgg
accgacggctccgtcacccccctcgaggccctgaaccaggcggtggagatcctccgggag
cacctcacctacttctccaacccccaggcggccgccgtggcggcccccgaggaggccaag
gagcccgaggcgccgccagagcaggaggaggagctggacctgcccttggaggagctcggc
ctctccacccgggtgctccacagcctcaaggaggagggcattgagtccgtccgggccctt
ctcgccctcaacctcaaggacctgaagaacatccccgggattggggagcggagcctggag
gagatcaaggaagccctggagaagaagggcttcaccctgaaggagtga
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