Thermus thermophilus HB8: TTHA1806
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Entry
TTHA1806 CDS
T00220
Symbol
TTHA1806
Name
(GenBank) MutM protein (formamidopyrimidine-DNA glycosylase) (Fpg)
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ttj
Thermus thermophilus HB8
Pathway
ttj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ttj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TTHA1806 (TTHA1806)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttj03400
]
TTHA1806 (TTHA1806)
Enzymes [BR:
ttj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
TTHA1806 (TTHA1806)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TTHA1806 (TTHA1806)
DNA repair and recombination proteins [BR:
ttj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TTHA1806 (TTHA1806)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
DUF7573
Zn_ribbon_Nudix
Zn_ribbon_6
Zn_Ribbon_TF
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BAD71629
UniProt:
O50606
Structure
PDB
PDBj
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All DBs
Position
1:1684475..1685278
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AA seq
267 aa
AA seq
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MPELPEVETTRRRLRPLVLGQTLRQVVHRDPARYRNTALAEGRRILEVDRRGKFLLFALE
GGVELVAHLGMTGGFRLEPTPHTRAALVLEGRTLYFHDPRRFGRLFGVRRGDYREIPLLL
RLGPEPLSEAFAFPGFFRGLKESARPLKALLLDQRLAAGVGNIYADEALFRARLSPFRPA
RSLTEEEARRLYRALREVLAEAVELGGSTLSDQSYRQPDGLPGGFQTRHAVYGREGLPCP
ACGRPVERRVVAGRGTHFCPTCQGEGP
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagcttcccgaggtggagaccacccgtaggcggctgcgccccctggtcctgggc
cagacccttaggcaggtggtccaccgcgaccccgcccgctaccggaacacggccctggcg
gaggggaggcggatcctggaggtggaccgccgggggaagttcctcctcttcgccctcgag
ggcggggtggagctcgtggcccacctggggatgacgggggggttccggctggagccgacg
ccccacacccgggcggccctggtcctcgagggccggaccctctacttccacgacccccgg
cgcttcgggcgcctctttggggtgcggcgcggggactaccgggagatccccctcctcctc
cgcctcggccccgagcccctctcggaggccttcgcctttcccgggttcttccgagggctg
aaggagagcgcgaggccccttaaggccctcctcctggaccagcgcctcgccgccggggtg
ggcaacatctacgccgacgaggccctcttccgcgcccgcctaagccccttccgccccgcc
cgaagcctcaccgaggaggaggcgcggcgcctctaccgggccctgcgcgaggtgctggcg
gaggccgtggaactcgggggaagcaccctctcggaccaaagctaccgccagcccgacggc
ctccctgggggcttccagacgcgccacgccgtctacggccgggagggcctcccctgcccg
gcctgcgggcgcccggtggagcggcgggtggtggccgggcggggcacccacttctgcccc
acctgccagggggaaggcccctag
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