Thermus thermophilus HB8: TTHA1817
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Entry
TTHA1817 CDS
T00220
Symbol
TTHA1817
Name
(GenBank) putative hydrolase (HD domain)
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ttj
Thermus thermophilus HB8
Pathway
ttj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TTHA1817 (TTHA1817)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttj03019
]
TTHA1817 (TTHA1817)
Messenger RNA biogenesis [BR:
ttj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TTHA1817 (TTHA1817)
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GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
KhpA-B_KH
DUF5662
DUF1664
Propep_M14
KH_2
Motif
Other DBs
NCBI-ProteinID:
BAD71640
UniProt:
Q5SHB3
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All DBs
Position
1:complement(1699933..1701657)
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AA seq
574 aa
AA seq
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MSLLDLVLLLLVLGLGGVLLLRRKGEDRSAQEARELLEAARREAREVLEAARKEARDILE
AARQEAKALRQEAEARAKAQREEVEAELRRRLEAAEAEAKKRLEEAGERLKAEREELRAE
RERLRSLQEELKEERERLKAEREELRREGERLAKRAEALDARAARLEEAEAELVRKEEAL
KAEARALEERLKEVERRLYEVAGLTPEEARRLVLERLDRELEEEKAQRVRAALERARLEA
RREAQKILAQAMQRQASETAAQLAVTVVPIPSDAMKGRIIGREGRNIRAFEALTGVDLII
DDTPDAVLLSSFNPIRREIARMALEELLKDGRIHPSRIEEVVEKAKQEMKTFIYERGEEA
ALEAGVVGLKPGLIQLLGRLHFRSSYGQNVLKHSIQVAHLAGIMAAELGLDAALARRAGL
LHDIGKSVDREVEGSHVEIGIALARRFGEPKEVVDAIAHHHDPDNAETLYAVLVAAADAL
SAARPGARRESLEEYLQRLEALERIALSFPGVETAFAVQAGREVRVIVKPEKISDAKATL
LAREIASRIEKEMNYPGQVQVTVVRETRAVEYAR
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttctggacctggttcttctgctcctggtcctggggcttgggggggttctcctc
cttaggcggaagggggaggaccgctcggcccaggaggcccgggagctcctggaggcggcg
aggcgggaggcccgggaggtcctggaggccgcgcggaaggaggcccgggacatcctggag
gccgcccgccaggaggccaaggccctgcgccaggaggcggaggcccgggccaaggcccag
cgggaggaggtggaggcggagctcaggcgccgcctcgaggccgccgaggccgaggccaaa
aagcgcctggaggaggcgggggaacgcctcaaggcggagcgggaggagcttcgcgccgag
cgggagcgcctgaggtccctccaggaggagctcaaggaggagcgggagcgcctcaaggcg
gagcgggaggagctccgccgggagggggagcggctcgccaagcgggccgaggccctggac
gccagggcggcgcggctggaggaggcggaggcggagcttgtccgcaaggaggaggcgctc
aaggcggaggccagggccctggaggagcggcttaaggaggtggagcggaggctctacgag
gtggcgggcctcacccccgaggaggcccgcaggctcgtcctggagcgcctggaccgggag
ctggaggaggagaaggcccagagggtgcgggccgccttggagcgggcccgcctcgaggcc
cggcgggaggcgcagaagatcctggcccaggccatgcagcgccaggcctcggagaccgcg
gcccagctcgccgtgaccgtggtgcccatcccctccgacgccatgaaggggcggatcatc
ggccgggaggggcggaacatccgcgcctttgaggccctgacgggggtggacctcatcatt
gacgacaccccggacgccgtcctcctctcctccttcaaccccatccgccgcgagatcgcc
cgcatggccctggaggagctcttgaaggacggccgcatccacccgagccgcattgaggag
gtggtggagaaggccaagcaggagatgaagaccttcatctacgagcgcggggaggaggcg
gccttggaggcgggggtggtgggcctgaagcccggcctcatccagcttttgggccggctc
cacttccgctccagctacggccagaacgtcctcaagcactccatccaggtggcccacctc
gccgggatcatggcggcggagctcggcctggacgccgctttggcccggcgggccgggctc
ctccacgacatcggcaagagcgtggaccgggaggtggagggaagccacgtggagatcggc
atcgccctggcgaggcgcttcggggagcccaaggaggtggtggacgccatcgcccaccac
cacgaccccgacaacgccgagaccctctacgccgtcttggtggccgcggccgacgccctc
tcggcggcgcggcccggggcgaggcgggagagcctcgaggagtacctccagcgcctggag
gccctggagcgcatcgccctctccttccccggggtggagacggccttcgccgtgcaggcg
ggccgggaggtgcgggtcatcgtcaagccggagaagatcagcgacgccaaggccaccctc
ctggcccgggagatcgcgagccgcattgagaaggagatgaactacccgggccaggtccag
gtgaccgtggtgcgggagacccgggcggtggagtacgctaggtga
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