Thermosulfidibacter takaii: TST_0112
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Entry
TST_0112 CDS
T04192
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ttk
Thermosulfidibacter takaii
Pathway
ttk03030
DNA replication
ttk03430
Mismatch repair
ttk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TST_0112 (holA)
03430 Mismatch repair
TST_0112 (holA)
03440 Homologous recombination
TST_0112 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttk03032
]
TST_0112 (holA)
03400 DNA repair and recombination proteins [BR:
ttk03400
]
TST_0112 (holA)
Enzymes [BR:
ttk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TST_0112 (holA)
DNA replication proteins [BR:
ttk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TST_0112 (holA)
DNA repair and recombination proteins [BR:
ttk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TST_0112 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
BAT70922
UniProt:
A0A0S3QRF5
LinkDB
All DBs
Position
113461..114432
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AA seq
323 aa
AA seq
DB search
MRMRVLTPKEFARTYPKKKSNVVFIFGSESAFIRRTLELVKETWKVPPESIKDFYDAEDV
DLAKISDALTASSLFSSENIVILREAYAFFKGLSSREKESFLSLLKKLPATTCFVMVDSR
EDDVSSSEHSMLKQLASVDGVAVNCRRARSGELKAWLRKKLAKMGIDDSSLVEALIEASG
GSMEALQKELEKLLTGFNKDSLSKTDSVSVYDFTNAVLDMDVKAFELLNKLYSLDVQPHI
IIATLESSLRNILLWNVGLKRFPPFVERRFKKILENVGEKRVKELYEKAIVLERKAKLTA
SGDVLRKLLEGFVLDCIWPALKI
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
ttgaggatgagggttctgactcccaaggagtttgcaaggacatatcccaagaaaaaaagc
aatgttgtcttcattttcggctctgagagtgcctttatcagaagaaccctcgagcttgtg
aaggaaacctggaaggttccacctgaaagcattaaagacttttacgatgcagaggatgtt
gatttagcgaagatttctgatgccctcacggcctcttctcttttttcttcggaaaatatt
gttatactcagagaggcttatgctttctttaagggactttcctcaagggaaaaagaatct
tttctttcccttttgaagaaattgccagccaccacctgttttgtgatggttgacagtagg
gaagatgatgtctcttcttcagaacactccatgctgaaacagttggcttcagtggatggg
gttgccgttaactgtaggagggcaagaagcggtgagctaaaggcttggttaagaaaaaag
cttgctaaaatgggtatagacgacagtagcctagtagaggctcttatagaggcatcgggt
ggcagcatggaggctcttcaaaaggagctggaaaaactgttaactggtttcaataaagat
tctctttcaaaaactgattcggttagtgtttacgattttaccaatgcggttttggatatg
gatgtaaaggcttttgagcttttaaataaactttactctctggatgttcagccccatatc
ataatagccactctggagagttccttgcgtaatatcctcttgtggaatgttggattaaag
agattcccgccctttgtggagagaagatttaaaaagatactggagaatgtgggggagaaa
agagtaaaagagctctatgagaaggccattgttcttgaaagaaaggctaagcttaccgct
tcaggggatgttttgagaaaactactggaaggattcgttttggattgcatctggcccgca
ttaaaaatttaa
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