Thermosulfidibacter takaii: TST_0519
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Entry
TST_0519 CDS
T04192
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ttk
Thermosulfidibacter takaii
Brite
KEGG Orthology (KO) [BR:
ttk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ttk03016
]
TST_0519 (ligT)
Enzymes [BR:
ttk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
TST_0519 (ligT)
Transfer RNA biogenesis [BR:
ttk03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
TST_0519 (ligT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
BAT71325
UniProt:
A0A0S3QSM1
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All DBs
Position
532367..532936
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AA seq
189 aa
AA seq
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MKIRAFVAVELSDEIKNAVSKDAEELKKVGVKGSYPRKEAYHITLKFLGNIDENKVDRIL
RSLQEKLQGVSPFEIEVADRGAFPNIYNPRVLWCGITKGSEQLRDLNNRVERALEPLGFK
KEEREFHPHVTLCRVKRINSQTKRYIQQFASKKEHYGKCKISRVVLFKSILRPEGAKYEE
LGSIELGGD
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaattagggcctttgtggctgtggaactttcggatgaaattaagaacgcagtatct
aaagacgctgaggagctaaaaaaggtcggagttaaagggtcctatccgaggaaggaagca
tatcatatcaccctgaaatttctgggaaatatagatgaaaataaagtggatcgaatttta
agatctttgcaggaaaaactacagggtgttagtccctttgagatagaggtggccgatcga
ggggctttcccaaacatttataatccaagggtgttgtggtgtggaataactaaaggttct
gagcaattaagggatctcaataatagagttgagagagctttggaaccgttgggcttcaaa
aaagaggagagagaattccaccctcatgttaccctgtgcagggttaaacgcattaatagc
cagacaaagaggtatatccaacaattcgccagtaaaaaggagcactacgggaagtgtaaa
attagcagagtggtgctgttcaagagcattttaagacctgaaggggctaaatatgaagaa
ttgggatctattgaattgggaggggattag
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