Thermosulfidibacter takaii: TST_0965
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Entry
TST_0965 CDS
T04192
Name
(GenBank) DNA helicase II/ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ttk
Thermosulfidibacter takaii
Pathway
ttk03420
Nucleotide excision repair
ttk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ttk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TST_0965
03430 Mismatch repair
TST_0965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttk03400
]
TST_0965
Enzymes [BR:
ttk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TST_0965
DNA repair and recombination proteins [BR:
ttk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TST_0965
MMR (mismatch excision repair)
Other MMR factors
TST_0965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
CarD_TRCF_RID
AAA_22
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
BAT71763
UniProt:
A0A0S3QTW4
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All DBs
Position
complement(986652..988817)
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AA seq
721 aa
AA seq
DB search
MRLVEEKILEGLTPSQREAVTTVDGPLLILAGAGSGKTRVITHRTAYLMHEGVPGHNILC
LTFTNKAAGEMKTRVLSILGLGEEATRGYGVPFLSTFHSFCLWGLRRFADRLGYGPDFIV
VDETDQLGIVKEILKRLNLYPKRYSPKALVEVISNTKISMIKPEGVPLYGPLASVFPEIY
KEYQRILREGNLMDFDDLLVNAYKLLSEDEVAKDFFSNRFSHVMVDEYQDTNRIQYLIVK
ELCEKHRNICVVGDDDQSIYSWRGADIRNILDFEKDFPEAKVVKLEENFRSTKIILDAAW
HVVKNNVMRKEKRLKPVKEGGEKIRFFVADSDRDEARFVVDEIERLGRPYKDYAIFYRTN
AQSRPFEEELINRGIPYVVVGGIRFYERKEIKDIIAYLRFIRNPNDIYAFKRIVNVPARG
IGATTVGRILDYVERSGTSLWDILINIDSIHVLSSSAANKVKNFVKLIEELRFLVSMVPF
SELVQTIIEKTGYRAMLEAEGTREAEGRLENLRELVNVASEFDDLEDGLSVFLDRSVLSA
PVDEVNADNAVTLMTLHSAKGLEFPVVFMVGMEEGFLPHYRSQESSYALEEERRLCYVGM
TRAKELLYLTRAERRLFYGVTKSFEPSRFLEEIPEELIERVDRRGEIVQSERVSFREKPV
MKEEDNPSQFKKGDTVVHPHFGKGRVIEISGRGESLKVRVRFYKYGVKLLSLQHANLRKV
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
gtgaggttggttgaagagaagatactggaaggtttaaccccgtcacagagggaggcagtt
accacagttgatgggccactattgattttggctggtgctggctctgggaaaacaagggtg
ataacccatagaactgcctatctcatgcacgaaggagtaccgggccataatattttatgc
cttacctttaccaacaaagctgctggcgagatgaaaacaagggttctttccatactcggg
ttgggagaagaggccacaaggggctacggtgttcccttcctttctacctttcactccttc
tgtttatgggggctaagacgctttgcagacaggcttgggtacggtccggactttatagtt
gtggatgagactgatcaactgggtatagttaaggagattttgaaaaggcttaacctttat
cccaagcgatactccccaaaggctctggttgaggtcatatccaatacgaagataagcatg
attaaacctgagggagtgcctttgtatggtcctttagcatctgttttcccagaaatttac
aaagaatatcaaaggatcctgagagaaggtaatcttatggactttgatgatcttctcgtt
aatgcatacaagcttttgagtgaagatgaggttgctaaggatttcttcagtaataggttt
tcccacgtgatggtggacgaatatcaggataccaaccggattcagtatttgatagtgaag
gagctatgtgaaaagcacagaaacatctgcgttgtgggtgatgatgatcagtccatctac
tcttggagaggagctgacatcagaaacattcttgatttcgaaaaggactttcctgaggct
aaagtggttaaattagaggagaactttagatctaccaagataatccttgatgctgcctgg
cacgtggtcaagaacaatgtaatgcgcaaggaaaaaaggctaaaaccggtaaaagagggt
ggagagaagataagattttttgttgcagatagtgatagagatgaggccaggttcgttgtg
gacgaaatagagagactcggaagaccctataaagattacgctatcttttacagaaccaat
gcccagtccagaccttttgaggaagagctcatcaacaggggaattccctatgtggttgtc
gggggtatcaggttttacgagagaaaagagataaaggatatcatcgcttatctaaggttt
ataagaaatcccaatgatatctatgctttcaagcgtatagttaatgttcctgccagaggc
attggagctactactgttggtagaattcttgattacgtggaaagaagtggcacttctttg
tgggatattctcataaatatagatagcatccatgtgctttcttcttccgctgcaaacaag
gttaaaaactttgtgaagctaatagaggagttgagatttctggtgtctatggtgcctttt
tctgagttggttcagacgataattgaaaaaaccggctacagggcgatgttggaagcagaa
ggcaccagagaggcagaaggaagacttgagaacctgagagaacttgttaacgtggcaagc
gagtttgatgatttagaggatggcctttcagtgtttctggacagatctgtactttcagcg
ccggtggatgaggttaacgccgataacgcagtcactctcatgaccctacactccgctaag
ggattggaatttcctgttgtttttatggtgggtatggaggagggcttcttgccccattac
cgttctcaggaatcttcctatgccttggaagaggaaagacgcctctgttatgttggaatg
accagggcaaaggagctgctctatcttacgagggctgaaagaagattgttttatggggtg
accaaaagctttgaaccctcacggttcttagaagagataccagaagagctgatagaaaga
gtggatagaagaggcgaaattgttcagtcagaaagagtctcatttagagaaaagccggtt
atgaaagaagaagacaacccctcccagtttaaaaaaggcgatacagttgtccatcctcat
tttggaaagggcagggtgattgagatttcagggagaggtgaatccttgaaggttagggtg
agattctataagtatggtgttaagctccttagcttgcagcatgccaatctaagaaaggtg
gggtga
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