Thermosulfidibacter takaii: TST_1465
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Entry
TST_1465 CDS
T04192
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ttk
Thermosulfidibacter takaii
Pathway
ttk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TST_1465 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttk03019
]
TST_1465 (deaD)
03009 Ribosome biogenesis [BR:
ttk03009
]
TST_1465 (deaD)
Enzymes [BR:
ttk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TST_1465 (deaD)
Messenger RNA biogenesis [BR:
ttk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TST_1465 (deaD)
Ribosome biogenesis [BR:
ttk03009
]
Prokaryotic type
rRNA helicases
TST_1465 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
Helicase_C_2
Glyoxalase_3
SBF_like
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
BAT72251
UniProt:
A0A0S3QVA1
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All DBs
Position
complement(1487724..1488824)
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AA seq
366 aa
AA seq
DB search
MIFEKLGRNVRKALSSMGYEKPTPVQERVIPLALEGKDVVAVADTGTGKTAAFGIPIVQM
LSRRFREVKALILVPTRELASQVADEIWKLGRFKGIRVAAMYGGKPVRRDISLLKRGSLQ
VVVGTPGRIADLIERGALWLSSIKFLVLDEVDRMLDMGFEEDINYIIESCSEERQTMFFS
ATLPEGIRSMMSDYLRDDFELIEVESRELKPKIEHRLFGTHRDRFGTLLGVLQRFENGGN
AIIFVNRKVEAQELAEKLQQAGISKVACLHGDMSQRKREAVMAAFRKGRVKTLVATDVAA
RGIDVRSVELVINYRLPEDPDMYTHRAGRTARAGSSGLAVSLVSRRDFVPLKRIDALRRV
RIEHLN
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgagaagttgggaagaaacgtgagaaaagctttgagttctatgggttatgag
aaacccaccccggtgcaagaaagggttattcccctggctttggaaggaaaggatgtggtt
gctgtagctgatactgggactggtaagacagctgcttttgggatacccattgtccagatg
ctttcgaggagatttcgtgaggttaaggcgctgatccttgttcccacaagagagctggca
tctcaggtggccgatgagatatggaaactgggaagatttaagggtattagggttgctgcc
atgtacggtggtaaaccagtcagaagagacatttctctcttgaaaagaggtagtcttcag
gtagttgtgggcactcctggtcgaatagctgatctgattgagagaggagccttgtggttg
tcttctattaagtttttggtcttggatgaagtagacaggatgctggatatgggttttgag
gaggatatcaactacatcatagagagttgttctgaggaaaggcagactatgttcttttca
gctacgttgcctgagggcatcagaagtatgatgtcggattatctgagagatgatttcgaa
ctcatagaagtagagagccgcgagttaaagcccaagatagagcacaggctctttggcaca
cacagggatagattcggtacattgctgggagttttgcagcggtttgagaacggtggtaac
gccataatctttgttaacagaaaggtagaggcccaggagctggcagaaaagttgcagcaa
gctggtatctcgaaggtagcatgtcttcatggtgatatgagccagaggaagagagaggct
gttatggcggctttcaggaagggacgcgtgaaaacccttgtagccacagatgttgcagca
agaggtatagatgtgagaagtgttgaactggtaatcaactacaggttgcctgaagatcct
gatatgtacacccatagggcgggtagaacagcaagagcaggtagttctggattggccgtt
agtcttgtttcaaggagagattttgtgcctttaaaaagaatcgacgctttgagaagggta
aggatagaacatttgaattaa
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integrated database retrieval system
